RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 TLR2O60603 784 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 GADD45BO75293 160 aaPredicted RBP11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 TDP2O95551 362 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 MYCLP12524 364 aaPredicted RBP11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 EIF2AK2P19525 551 aaKnown RBP11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 CMA1P23946 247 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 LONP1P36776 959 aaKnown RBP11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 SETQ01105 290 aaPredicted RBP11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 KLHL40Q2TBA0 621 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 Q4G0T1 1027 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 PRR16Q569H4 304 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 PCNX4Q63HM2 1172 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 POTEEQ6S8J3 1075 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 NLRX1Q86UT6 975 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 MRPS27Q92552 414 aaKnown RBP11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 CCDC34Q96HJ3 373 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 IWS1Q96ST2 819 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 PXMP2Q9NR77 195 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 SLC5A4Q9NY91 659 aa11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 FBXO2Q9UK22 296 aaPredicted RBP11.84□□□□□ -0.51
TMEM55B-205ENST00000554028 CA12O43570 354 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 PEX10O60683 326 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 STAM2O75886 525 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 MAP2K2P36507 400 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 TXKP42681 527 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 UBXN2AP68543 259 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 PGM5Q15124 567 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 CEP55Q53EZ4 464 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 NIPA1Q7RTP0 329 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 PLA2G4DQ86XP0 818 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 ABRAQ8N0Z2 381 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 C4orf32Q8N8J7 132 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 FSIP1Q8NA03 581 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 CRYGNQ8WXF5 182 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 AK8Q96MA6 479 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 FAM20AQ96MK3 541 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 MBOAT7Q96N66 472 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 PDCD2LQ9BRP1 358 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 PYM1Q9BRP8 204 aaKnown RBP11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 COL20A1Q9P218 1284 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 TCEAL9Q9UHQ7 104 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 CPA4Q9UI42 421 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 PCDHA12Q9UN75 941 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 STK24Q9Y6E0 443 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 RPTORQ8N122 1335 aa11.83□□□□□ -0.52
TMEM55B-205ENST00000554028 PTPRFP10586 1907 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 LOC102724159A0A0B4J2E5 919 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 WNT7AO00755 349 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 MAFGO15525 162 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 NR3C2P08235 984 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 UBA7P41226 1012 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 PDE4DQ08499 809 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 PDIA5Q14554 519 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 PWP2Q15269 919 aaKnown RBP11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 STXBP2Q15833 593 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 GNPTABQ3T906 1256 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 AXDND1Q5T1B0 1012 aaPredicted RBP11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 PLEKHH3Q7Z736 793 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 VSIG10LQ86VR7 867 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 RASSF8Q8NHQ8 419 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 CDHR1Q96JP9 859 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 CLIC6Q96NY7 704 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 MXRA8Q9BRK3 442 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 CSRNP2Q9H175 543 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 TMEM60Q9H2L4 133 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 FRMPD4Q14CM0 1322 aa11.82□□□□□ -0.52
TMEM55B-205ENST00000554028 ASB14A6NK59 587 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 FAM86B1E9PN63 330 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 MEIS1O00470 390 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 SLC37A4O43826 429 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 KINO60870 393 aaKnown RBP11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 EIF3JO75822 258 aaKnown RBP11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 FAM86B2P0C5J1 330 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 BCRP11274 1271 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 TECP42680 631 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 SYKP43405 635 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 FAM160A1Q05DH4 1040 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 RESP18Q5W5W9 173 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 C17orf99Q6UX52 265 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 DPP9Q86TI2 863 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 ERMNQ8TAM6 284 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 GPT2Q8TD30 523 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 MTMR9Q96QG7 549 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 ZNF577Q9BSK1 485 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 PORCNQ9H237 461 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 TTC12Q9H892 705 aaPredicted RBP11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 JADE2Q9NQC1 790 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 CCDC39Q9UFE4 941 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 HOOK1Q9UJC3 728 aaKnown RBP11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 UBIAD1Q9Y5Z9 338 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 MRVI1Q9Y6F6 885 aa11.81□□□□□ -0.52
TMEM55B-205ENST00000554028 A0A1B0GVL5 298 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 SLC15A5A6NIM6 579 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 AOC2O75106 756 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 LETM1O95202 739 aaPredicted RBP11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 ALDH5A1P51649 535 aaPredicted RBP11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 CNTN2Q02246 1040 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms