RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 MOV10L1Q9BXT6 1211 aaKnown RBP16.61■□□□□ 0.25
SHMT2-208ENST00000553868 STARD7Q9NQZ5 370 aa16.61■□□□□ 0.25
SHMT2-208ENST00000553868 SEC63Q9UGP8 760 aaKnown RBP16.61■□□□□ 0.25
SHMT2-208ENST00000553868 ISY1Q9ULR0 285 aaKnown RBP16.61■□□□□ 0.25
SHMT2-208ENST00000553868 RAD21O60216 631 aa16.6■□□□□ 0.25
SHMT2-208ENST00000553868 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
SHMT2-208ENST00000553868 SCG2P13521 617 aa16.6■□□□□ 0.25
SHMT2-208ENST00000553868 TAL1P17542 331 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-208ENST00000553868 VCAM1P19320 739 aa16.6■□□□□ 0.25
SHMT2-208ENST00000553868 PTMSP20962 102 aa16.6■□□□□ 0.25
SHMT2-208ENST00000553868 PSRC1Q6PGN9 363 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-208ENST00000553868 CERS4Q9HA82 394 aa16.6■□□□□ 0.25
SHMT2-208ENST00000553868 NDUFB10O96000 172 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 BMP3P12645 472 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 ERCC3P19447 782 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 ACLYP53396 1101 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 FOSBP53539 338 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 IRX5P78411 483 aaPredicted RBP16.59■□□□□ 0.25
SHMT2-208ENST00000553868 PFKFB3Q16875 520 aaPredicted RBP16.59■□□□□ 0.25
SHMT2-208ENST00000553868 MCTP1Q6DN14 999 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 CCDC174Q6PII3 467 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 OTOP2Q7RTS6 562 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 MAML3Q96JK9 1138 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 PHOX2BQ99453 314 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 GPCPD1Q9NPB8 672 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 SH3GLB2Q9NR46 395 aa16.59■□□□□ 0.25
SHMT2-208ENST00000553868 FRMPD2Q68DX3 1309 aaPredicted RBP16.59■□□□□ 0.25
SHMT2-208ENST00000553868 A0A1W2PRG0 241 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 EPOPA6NHQ4 379 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 DDX11L8A8MPP1 907 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 hCG_1984214I3L0E3 225 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 CYP2C18P33260 490 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 USP14P54578 494 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 GNL2Q13823 731 aaKnown RBP16.58■□□□□ 0.24
SHMT2-208ENST00000553868 LBX2Q6XYB7 198 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 TMEM199Q8N511 208 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 ZNF713Q8N859 430 aaPredicted RBP16.58■□□□□ 0.24
SHMT2-208ENST00000553868 ACER1Q8TDN7 264 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 CCDC12Q8WUD4 166 aaPredicted RBP16.58■□□□□ 0.24
SHMT2-208ENST00000553868 KIAA1683Q9H0B3 1180 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 RIOX1Q9H6W3 641 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 BRMS1Q9HCU9 246 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 MYH4Q9Y623 1939 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 BRWD1Q9NSI6 2320 aa16.58■□□□□ 0.24
SHMT2-208ENST00000553868 ADAMTS4O75173 837 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 BAG4O95429 457 aaKnown RBP16.57■□□□□ 0.24
SHMT2-208ENST00000553868 CALML3P27482 149 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 GUCY1B3Q02153 619 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 PKN1Q16512 942 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 BRAPQ7Z569 592 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 CCDC148Q8NFR7 591 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 AIFM3Q96NN9 605 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 RPAP3Q9H6T3 665 aaPredicted RBP16.57■□□□□ 0.24
SHMT2-208ENST00000553868 IL23AQ9NPF7 189 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 COG5Q9UP83 839 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 CFAP54Q96N23 3096 aa16.57■□□□□ 0.24
SHMT2-208ENST00000553868 MYADML2A6NDP7 307 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 STRNO43815 780 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 TRAF1Q13077 416 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 IKQ13123 557 aaPredicted RBP16.56■□□□□ 0.24
SHMT2-208ENST00000553868 RESTQ13127 1097 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 ATL3Q6DD88 541 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 KCTD1Q719H9 257 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 FERMT3Q86UX7 667 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 FAM160B2Q86V87 743 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 CHURC1Q8WUH1 139 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 HLA-CQ95604 372 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 UBA5Q9GZZ9 404 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 SPATC1LQ9H0A9 340 aa16.56■□□□□ 0.24
SHMT2-208ENST00000553868 ZNFX1Q9P2E3 1918 aaKnown RBP16.55■□□□□ 0.24
SHMT2-208ENST00000553868 CYTH3O43739 400 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 GTPBP6O43824 516 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-208ENST00000553868 FGBP02675 491 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 MMP1P03956 469 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 MCM4P33991 863 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 NFKBIBQ15653 356 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 KCNA10Q16322 511 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 GALNT17Q6IS24 598 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 BTNL9Q6UXG8 535 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 RASGRP2Q7LDG7 609 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 PIBF1Q8WXW3 757 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 ZNF396Q96N95 335 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-208ENST00000553868 VAT1LQ9HCJ6 419 aa16.55■□□□□ 0.24
SHMT2-208ENST00000553868 UMODL1Q5DID0 1318 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 SYNRGQ9UMZ2 1314 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 PNMA6FA0A0J9YX94 578 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 hCG_1642624A0A1W2PR95 340 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 WDR46O15213 610 aaKnown RBP16.54■□□□□ 0.24
SHMT2-208ENST00000553868 PLA2G6O60733 806 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 CDK7P50613 346 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 STAT2P52630 851 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 NLRP5P59047 1200 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 KRT85P78386 507 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 SYDE2Q5VT97 1194 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 HEATR3Q7Z4Q2 680 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 NCAPG2Q86XI2 1143 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms