RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 PTCH2Q9Y6C5 1203 aa20.57■□□□□ 0.88
PSEN1-208ENST00000553719 WNT7AO00755 349 aa20.56■□□□□ 0.88
PSEN1-208ENST00000553719 F13A1P00488 732 aa20.56■□□□□ 0.88
PSEN1-208ENST00000553719 CCND2P30279 289 aa20.56■□□□□ 0.88
PSEN1-208ENST00000553719 TOB1P50616 345 aaPredicted RBP20.56■□□□□ 0.88
PSEN1-208ENST00000553719 USP11P51784 963 aa20.56■□□□□ 0.88
PSEN1-208ENST00000553719 MOXD1Q6UVY6 613 aa20.56■□□□□ 0.88
PSEN1-208ENST00000553719 INPP4AQ96PE3 977 aaPredicted RBP20.56■□□□□ 0.88
PSEN1-208ENST00000553719 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.56■□□□□ 0.88
PSEN1-208ENST00000553719 CIZ1Q9ULV3 898 aaPredicted RBP20.56■□□□□ 0.88
PSEN1-208ENST00000553719 UBIAD1Q9Y5Z9 338 aa20.56■□□□□ 0.88
PSEN1-208ENST00000553719 IGLV3-22A0A075B6J6 115 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 CYP3A7-CYP3A51PA0A087WV96 503 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 ADCY3O60266 1144 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 STAM2O75886 525 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 ITGB5P18084 799 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 CYP3A7P24462 503 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 TRAPPC10P48553 1259 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 STXBP2Q15833 593 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 NEK8Q86SG6 692 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 RAET1EQ8TD07 263 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 LENG9Q96B70 501 aa20.55■□□□□ 0.88
PSEN1-208ENST00000553719 ZSCAN16Q9H4T2 348 aaPredicted RBP20.55■□□□□ 0.88
PSEN1-208ENST00000553719 B4DLN1 442 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 FAM86B1E9PN63 330 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 EIF3JO75822 258 aaKnown RBP20.54■□□□□ 0.88
PSEN1-208ENST00000553719 FAM86B2P0C5J1 330 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 MYCLP12524 364 aaPredicted RBP20.54■□□□□ 0.88
PSEN1-208ENST00000553719 ELNP15502 786 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 CYP2C19P33261 490 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 PDE4DQ08499 809 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 GNL2Q13823 731 aaKnown RBP20.54■□□□□ 0.88
PSEN1-208ENST00000553719 MAP3K21Q5TCX8 1036 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 MYSM1Q5VVJ2 828 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 SLAIN1Q8ND83 568 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 MPHOSPH6Q99547 160 aaKnown RBP20.54■□□□□ 0.88
PSEN1-208ENST00000553719 VTA1Q9NP79 307 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 NRBP1Q9UHY1 535 aa20.54■□□□□ 0.88
PSEN1-208ENST00000553719 RBM47A0AV96 593 aaKnown RBP20.53■□□□□ 0.88
PSEN1-208ENST00000553719 MEIS1O00470 390 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 TDP2O95551 362 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 HMGCRP04035 888 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 ZNF865P0CJ78 1059 aaPredicted RBP20.53■□□□□ 0.88
PSEN1-208ENST00000553719 CYBAP13498 195 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 TRIM32Q13049 653 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 CEP55Q53EZ4 464 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 PPP4R3AQ6IN85 833 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 TAPT1Q6NXT6 567 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 FBXO16Q8IX29 292 aaPredicted RBP20.53■□□□□ 0.88
PSEN1-208ENST00000553719 CYP2W1Q8TAV3 490 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 ZFP91Q96JP5 570 aaPredicted RBP20.53■□□□□ 0.88
PSEN1-208ENST00000553719 MXRA8Q9BRK3 442 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 ABHD16BQ9H3Z7 469 aa20.53■□□□□ 0.88
PSEN1-208ENST00000553719 ICAM3P32942 547 aa20.52■□□□□ 0.88
PSEN1-208ENST00000553719 NUCB2P80303 420 aa20.52■□□□□ 0.88
PSEN1-208ENST00000553719 SEMA3FQ13275 785 aa20.52■□□□□ 0.88
PSEN1-208ENST00000553719 Q4G0T1 1027 aa20.52■□□□□ 0.88
PSEN1-208ENST00000553719 RILPL1Q5EBL4 403 aa20.52■□□□□ 0.88
PSEN1-208ENST00000553719 NIPA1Q7RTP0 329 aa20.52■□□□□ 0.88
PSEN1-208ENST00000553719 TRPV1Q8NER1 839 aa20.52■□□□□ 0.88
PSEN1-208ENST00000553719 JADE2Q9NQC1 790 aa20.52■□□□□ 0.88
PSEN1-208ENST00000553719 GCFC2P16383 781 aaKnown RBP20.51■□□□□ 0.87
PSEN1-208ENST00000553719 GRK4P32298 578 aa20.51■□□□□ 0.87
PSEN1-208ENST00000553719 ORC2Q13416 577 aaPredicted RBP20.51■□□□□ 0.87
PSEN1-208ENST00000553719 ACVR2BQ13705 512 aa20.51■□□□□ 0.87
PSEN1-208ENST00000553719 LETM2Q2VYF4 491 aa20.51■□□□□ 0.87
PSEN1-208ENST00000553719 MFSD14CQ5VZR4 134 aa20.51■□□□□ 0.87
PSEN1-208ENST00000553719 FAM173BQ6P4H8 233 aa20.51■□□□□ 0.87
PSEN1-208ENST00000553719 FBXO46Q6PJ61 603 aaPredicted RBP20.51■□□□□ 0.87
PSEN1-208ENST00000553719 GPRASP2Q96D09 838 aa20.51■□□□□ 0.87
PSEN1-208ENST00000553719 SLC37A4O43826 429 aa20.5■□□□□ 0.87
PSEN1-208ENST00000553719 CACNB2Q08289 660 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-208ENST00000553719 NBR1Q14596 966 aa20.5■□□□□ 0.87
PSEN1-208ENST00000553719 PKN2Q16513 984 aaKnown RBP20.5■□□□□ 0.87
PSEN1-208ENST00000553719 TTC38Q5R3I4 469 aa20.5■□□□□ 0.87
PSEN1-208ENST00000553719 CCDC62Q6P9F0 684 aa20.5■□□□□ 0.87
PSEN1-208ENST00000553719 EEPD1Q7L9B9 569 aa20.5■□□□□ 0.87
PSEN1-208ENST00000553719 NAP1L4Q99733 375 aaKnown RBP20.5■□□□□ 0.87
PSEN1-208ENST00000553719 WDR11Q9BZH6 1224 aa20.5■□□□□ 0.87
PSEN1-208ENST00000553719 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.5■□□□□ 0.87
PSEN1-208ENST00000553719 RTEL1Q9NZ71 1219 aa20.5■□□□□ 0.87
PSEN1-208ENST00000553719 NOL7Q9UMY1 257 aaKnown RBP20.5■□□□□ 0.87
PSEN1-208ENST00000553719 CNPY2Q9Y2B0 182 aa20.5■□□□□ 0.87
PSEN1-208ENST00000553719 BRCA2P51587 3418 aa20.49■□□□□ 0.87
PSEN1-208ENST00000553719 SPATA31C2B4DYI2 1134 aa20.49■□□□□ 0.87
PSEN1-208ENST00000553719 PRKAR2AP13861 404 aaKnown RBP20.49■□□□□ 0.87
PSEN1-208ENST00000553719 SETQ01105 290 aaPredicted RBP20.49■□□□□ 0.87
PSEN1-208ENST00000553719 PRAMEF19Q5SWL8 479 aa20.49■□□□□ 0.87
PSEN1-208ENST00000553719 FOXD4L5Q5VV16 416 aaPredicted RBP20.49■□□□□ 0.87
PSEN1-208ENST00000553719 FOXD4L4Q8WXT5 416 aaPredicted RBP20.49■□□□□ 0.87
PSEN1-208ENST00000553719 KCNMB3Q9NPA1 279 aa20.49■□□□□ 0.87
PSEN1-208ENST00000553719 PDGFCQ9NRA1 345 aa20.49■□□□□ 0.87
PSEN1-208ENST00000553719 KCNH7Q9NS40 1196 aa20.49■□□□□ 0.87
PSEN1-208ENST00000553719 CHMP5Q9NZZ3 219 aa20.49■□□□□ 0.87
PSEN1-208ENST00000553719 PCDHB6Q9Y5E3 794 aa20.49■□□□□ 0.87
PSEN1-208ENST00000553719 MAFGO15525 162 aa20.48■□□□□ 0.87
PSEN1-208ENST00000553719 ADCY6O43306 1168 aa20.48■□□□□ 0.87
PSEN1-208ENST00000553719 FIBPO43427 364 aa20.48■□□□□ 0.87
PSEN1-208ENST00000553719 CCNT1O60563 726 aaKnown RBP20.48■□□□□ 0.87
PSEN1-208ENST00000553719 ARIH2O95376 493 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms