RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 NOVP48745 357 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 EPHB4P54760 987 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CORO7P57737 925 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 KIF5AQ12840 1032 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 SEPT2Q15019 361 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 SPA17Q15506 151 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 MIIPQ5JXC2 388 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 FKBP15Q5T1M5 1219 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 NCAPH2Q6IBW4 605 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CENPPQ6IPU0 288 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 C15orf52Q6ZUT6 534 aaKnown RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 KIAA1328Q86T90 577 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 EFCAB13Q8IY85 973 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CMTR1Q8N1G2 835 aaKnown RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 GUF1Q8N442 669 aaKnown RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CCDC82Q8N4S0 544 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 MREGQ8N565 214 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 RNF10Q8N5U6 811 aaKnown RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CSGALNACT2Q8N6G5 542 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 ZNF384Q8TF68 577 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 ATRIPQ8WXE1 791 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 PPM1EQ8WY54 764 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 SMARCC1Q92922 1105 aaPredicted RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 SECISBP2LQ93073 1101 aaKnown RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CNOT6LQ96LI5 555 aaKnown RBP5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 ALS2CR12Q96Q35 445 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CHP1Q99653 195 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 SH3GL2Q99962 352 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 RHOXF2Q9BQY4 288 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 CRACR2AQ9BSW2 395 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 PAGR1Q9BTK6 254 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 ZBED2Q9BTP6 218 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 TRIM9Q9C026 710 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 LRRC27Q9C0I9 530 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 ANKRD2Q9GZV1 360 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 ZMYND12Q9H0C1 365 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 BLZF1Q9H2G9 400 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 SH2D4AQ9H788 454 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 KAT14Q9H8E8 782 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 FAM204AQ9H8W3 233 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 ZNF287Q9HBT7 754 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 PRM3Q9NNZ6 103 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 GDAQ9Y2T3 454 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 HYOU1Q9Y4L1 999 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 MYH8P13535 1937 aa5.85□□□□□ -1.47
TMEM55B-204ENST00000553602 SNED1Q8TER0 1413 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 ATAD5Q96QE3 1844 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 LOC102724428A0A0B4J2F2 783 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 GRID2IPA4D2P6 1211 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PALM3A6NDB9 673 aaPredicted RBP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 TSPY2A6NKD2 308 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 BTNL10A8MVZ5 291 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 EXOC5O00471 708 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 OPA1O60313 960 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 LILRB3O75022 631 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 SYF2O95926 243 aaKnown RBP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 NDUFV2P19404 249 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 ANXA13P27216 316 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 CASP1P29466 404 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 GNA11P29992 359 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 CDC25AP30304 524 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PMS1P54277 932 aaKnown RBP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 SIK1P57059 783 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PPP4CP60510 307 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 SKOR1P84550 965 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 MECOMQ03112 1051 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 EHHADHQ08426 723 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 TBC1D8BQ0IIM8 1120 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PPFIA1Q13136 1202 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PSMD2Q13200 908 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 NONOQ15233 471 aaKnown RBP eCLIP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 MAN2A1Q16706 1144 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 C12orf60Q5U649 245 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PRPF38BQ5VTL8 546 aaKnown RBP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 ALS2CLQ60I27 953 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PPP1R18Q6NYC8 613 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 CCNI2Q6ZMN8 369 aaPredicted RBP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 SPATS2Q86XZ4 545 aaKnown RBP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PNMA1Q8ND90 353 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 FAM76AQ8TAV0 307 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 FAM84BQ96KN1 310 aaPredicted RBP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 MMS19Q96T76 1030 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 SELENOOQ9BVL4 669 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 NYXQ9GZU5 481 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 ZSWIM4Q9H7M6 989 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 NHEJ1Q9H9Q4 299 aaPredicted RBP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 RIC8AQ9NPQ8 531 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 LUC7LQ9NQ29 371 aaKnown RBP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PODXL2Q9NZ53 605 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 ABCF2Q9UG63 623 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 RABGEF1Q9UJ41 708 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 GUCA1BQ9UMX6 200 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PCDHA6Q9UN73 950 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 MINPP1Q9UNW1 487 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 NIP7Q9Y221 180 aaKnown RBP eCLIP5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 SIK3Q9Y2K2 1263 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 PCDHA8Q9Y5H6 950 aa5.84□□□□□ -1.47
TMEM55B-204ENST00000553602 MYH14Q7Z406 1995 aaKnown RBP5.84□□□□□ -1.48
TMEM55B-204ENST00000553602 SBF2Q86WG5 1849 aa5.83□□□□□ -1.48
TMEM55B-204ENST00000553602 MYO3BQ8WXR4 1341 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms