RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 MFSD5Q6N075 450 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 PLPP7Q8NBV4 271 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 FRAT1Q92837 279 aaPredicted RBP8.79□□□□□ -1
ATXN3-219ENST00000553488 CRNKL1Q9BZJ0 848 aaKnown RBP8.79□□□□□ -1
ATXN3-219ENST00000553488 ARHGEF10LQ9HCE6 1279 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 STARD7Q9NQZ5 370 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 THEGQ9P2T0 379 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 SWAP70Q9UH65 585 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 PPP1R9AQ9ULJ8 1098 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 TANC1Q9C0D5 1861 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 SYNGAP1Q96PV0 1343 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 ZNF532Q9HCE3 1301 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 SCN5AQ14524 2016 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 GRXCR1A8MXD5 290 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 VWA5AO00534 786 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 SNAI1O95863 264 aaPredicted RBP8.78□□□□□ -1
ATXN3-219ENST00000553488 IL2RAP01589 272 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 CDK7P50613 346 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 KCTD2Q14681 263 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 SLC9C2Q5TAH2 1124 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 LYSMD3Q7Z3D4 306 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 AACSQ86V21 672 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 HOMEZQ8IX15 550 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 CCDC155Q8N6L0 562 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 ATXN2LQ8WWM7 1075 aaKnown RBP8.78□□□□□ -1
ATXN3-219ENST00000553488 NANOS1Q8WY41 292 aaKnown RBP8.78□□□□□ -1
ATXN3-219ENST00000553488 FGD4Q96M96 766 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 PRDM12Q9H4Q4 367 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 SH2D4AQ9H788 454 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 PTPRSQ13332 1948 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 ZBED9Q6R2W3 1325 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 MUC6Q6W4X9 2439 aa8.78□□□□□ -1
ATXN3-219ENST00000553488 WDFY4Q6ZS81 3184 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 DNAJC25-GNG10A0A024R161 153 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 DCDC2CA8MYV0 355 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 PRKAB2O43741 272 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 RLBP1P12271 317 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-219ENST00000553488 COPB2P35606 906 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 GMPRP36959 345 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 PLA2G5P39877 138 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 STAT3P40763 770 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 PPIGQ13427 754 aaKnown RBP eCLIP8.77□□□□□ -1.01
ATXN3-219ENST00000553488 TTF1Q15361 905 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-219ENST00000553488 KCNA10Q16322 511 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 ZKSCAN2Q63HK3 967 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 CEP85Q6P2H3 762 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 MAMDC4Q6UXC1 1216 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 C16orf86Q6ZW13 317 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 FAM126BQ8IXS8 530 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 MSL3Q8N5Y2 521 aaKnown RBP8.77□□□□□ -1.01
ATXN3-219ENST00000553488 NUP133Q8WUM0 1156 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 ASB2Q96Q27 587 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 GAS2L1Q99501 681 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-219ENST00000553488 ESYT1Q9BSJ8 1104 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 UPF3AQ9H1J1 476 aaKnown RBP8.77□□□□□ -1.01
ATXN3-219ENST00000553488 ARMT1Q9H993 441 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 CNPY2Q9Y2B0 182 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 EXOC6BQ9Y2D4 811 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 COL4A4P53420 1690 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-219ENST00000553488 ELP1O95163 1332 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 MROH7Q68CQ1 1323 aa8.77□□□□□ -1.01
ATXN3-219ENST00000553488 CYP2D7A0A087X1C5 515 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 A6NJR5 290 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 SPATA31C2B4DYI2 1134 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 MEN1O00255 615 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 CTAGE5O15320 804 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 DUSP11O75319 330 aaKnown RBP8.76□□□□□ -1.01
ATXN3-219ENST00000553488 EEF2P13639 858 aaKnown RBP8.76□□□□□ -1.01
ATXN3-219ENST00000553488 CSF2RAP15509 400 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 CDK8P49336 464 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 FAM83BQ5T0W9 1011 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 C12orf60Q5U649 245 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 PSRC1Q6PGN9 363 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-219ENST00000553488 TET1Q8NFU7 2136 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.76□□□□□ -1.01
ATXN3-219ENST00000553488 CCDC17Q96LX7 622 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 KATNBL1Q9H079 304 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 CXXC1Q9P0U4 656 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-219ENST00000553488 ZHX1Q9UKY1 873 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-219ENST00000553488 RIPK3Q9Y572 518 aa8.76□□□□□ -1.01
ATXN3-219ENST00000553488 SCN10AQ9Y5Y9 1956 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 TRIOO75962 3097 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 A0A0U1RQG5 324 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-219ENST00000553488 ARVCFO00192 962 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 GOLIM4O00461 696 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 MBD4O95243 580 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 CD4P01730 458 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 ASGR1P07306 291 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 ACRP10323 421 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 ADD2P35612 726 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 GJA9P57773 515 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 NKX3-2P78367 333 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 SNRNP48Q6IEG0 339 aaKnown RBP8.75□□□□□ -1.01
ATXN3-219ENST00000553488 ZNF365Q70YC5 407 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 ERC1Q8IUD2 1116 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 PPM1EQ8WY54 764 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 HERVK_113Q902F9 699 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 GLT1D1Q96MS3 346 aa8.75□□□□□ -1.01
ATXN3-219ENST00000553488 UCN2Q96RP3 112 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms