RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 CCND3P30281 292 aaPredicted RBP16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 DDIT3P35638 169 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 ARHGAP4P98171 946 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 SEMA3FQ13275 785 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 ACVR2BQ13705 512 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 MTFR1Q15390 333 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 TMEM63BQ5T3F8 832 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 CYP2W1Q8TAV3 490 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 LENG9Q96B70 501 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 ZFP91Q96JP5 570 aaPredicted RBP16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 MBOAT7Q96N66 472 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 FOXP1Q9H334 677 aaPredicted RBP16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 VTA1Q9NP79 307 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 PAK6Q9NQU5 681 aaPredicted RBP16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 PDGFCQ9NRA1 345 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 MTMR6Q9Y217 621 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 UBIAD1Q9Y5Z9 338 aa16.96■□□□□ 0.31
MTHFD1-204ENST00000553405 WNT7AO00755 349 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 CCND2P30279 289 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 CIITAP33076 1130 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 PDE4DQ08499 809 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 TRIM29Q14134 588 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 BECN1Q14457 450 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 STXBP2Q15833 593 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 CCDC62Q6P9F0 684 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 KRT25Q7Z3Z0 450 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 TBCKQ8TEA7 893 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 UNC93B1Q9H1C4 597 aa16.95■□□□□ 0.3
MTHFD1-204ENST00000553405 FRMPD3Q5JV73 1810 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 CYP3A7-CYP3A51PA0A087WV96 503 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 FAM86B1E9PN63 330 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 STAM2O75886 525 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 ARIH2O95376 493 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 FAM86B2P0C5J1 330 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 MYCLP12524 364 aaPredicted RBP16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 CYP3A7P24462 503 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 ICAM3P32942 547 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 CCDC144BQ3MJ40 725 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 EEPD1Q7L9B9 569 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 CNPY2Q9Y2B0 182 aa16.94■□□□□ 0.3
MTHFD1-204ENST00000553405 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 MEIS1O00470 390 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 SEPT4O43236 478 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 PDCP20941 246 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 PTGS1P23219 599 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 USP11P51784 963 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 PKP1Q13835 747 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 NONOQ15233 471 aaKnown RBP eCLIP16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 INF2Q27J81 1249 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 LHX8Q68G74 356 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 PIK3AP1Q6ZUJ8 805 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 NOSTRINQ8IVI9 506 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 SPRYD3Q8NCJ5 442 aa16.93■□□□□ 0.3
MTHFD1-204ENST00000553405 B4DLN1 442 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 SPATA31C2B4DYI2 1134 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 CCL5P13501 91 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 ADCYAP1R1P41586 468 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 TOB1P50616 345 aaPredicted RBP16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 SP2Q02086 613 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 SAFBQ15424 915 aaKnown RBP eCLIP16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 CEP55Q53EZ4 464 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 MOXD1Q6UVY6 613 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 NIPA1Q7RTP0 329 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 LENG1Q96BZ8 264 aaPredicted RBP16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 MPHOSPH6Q99547 160 aaKnown RBP16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 MXRA8Q9BRK3 442 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 EHMT1Q9H9B1 1298 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 BRMS1Q9HCU9 246 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 JADE2Q9NQC1 790 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 RTEL1Q9NZ71 1219 aa16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 ZHX1Q9UKY1 873 aaPredicted RBP16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 GNEQ9Y223 722 aaKnown RBP16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 KIAA0100Q14667 2235 aaKnown RBP16.92■□□□□ 0.3
MTHFD1-204ENST00000553405 CCDC194A0A1B0GVG4 234 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 CTAGE5O15320 804 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 STX6O43752 255 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 TDP2O95551 362 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 SMPD1P17405 629 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 NKX3-2P78367 333 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 RESTQ13127 1097 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 SCFD2Q8WU76 684 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 GPRASP2Q96D09 838 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 WDR11Q9BZH6 1224 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 BCAS3Q9H6U6 928 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 HMX1Q9NP08 348 aaPredicted RBP16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 DDX41Q9UJV9 622 aaKnown RBP16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 ZDHHC9Q9Y397 364 aa16.91■□□□□ 0.3
MTHFD1-204ENST00000553405 H3BQV1 296 aa16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 ATP9AO75110 1047 aa16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 ARP10275 920 aa16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 AKR1A1P14550 325 aa16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 KCNA2P16389 499 aa16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 DUSP28Q4G0W2 176 aa16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 GJC2Q5T442 439 aaPredicted RBP16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 IFFO2Q5TF58 517 aa16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 IQSEC1Q6DN90 963 aa16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 SEPT14Q6ZU15 432 aa16.9■□□□□ 0.3
MTHFD1-204ENST00000553405 NEK8Q86SG6 692 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms