RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 PPP1R12CQ9BZL4 782 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 TRPV6Q9H1D0 765 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 HIPK3Q9H422 1215 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 DDX41Q9UJV9 622 aaKnown RBP14.97□□□□□ -0.01
ACTN1-207ENST00000553290 MRVI1Q9Y6F6 885 aa14.97□□□□□ -0.01
ACTN1-207ENST00000553290 PLEKHA8P1O95397 391 aa14.96□□□□□ -0.01
ACTN1-207ENST00000553290 HMGB1P09429 215 aaKnown RBP14.96□□□□□ -0.01
ACTN1-207ENST00000553290 RXRAP19793 462 aa14.96□□□□□ -0.01
ACTN1-207ENST00000553290 CCND2P30279 289 aa14.96□□□□□ -0.01
ACTN1-207ENST00000553290 SMAD3P84022 425 aaKnown RBP14.96□□□□□ -0.01
ACTN1-207ENST00000553290 EXOSC10Q01780 885 aaKnown RBP14.96□□□□□ -0.01
ACTN1-207ENST00000553290 PTPN11Q06124 597 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-207ENST00000553290 NBPF20Q3BBV1 942 aa14.96□□□□□ -0.01
ACTN1-207ENST00000553290 NFRKBQ6P4R8 1299 aa14.96□□□□□ -0.01
ACTN1-207ENST00000553290 DHX32Q7L7V1 743 aaKnown RBP14.96□□□□□ -0.01
ACTN1-207ENST00000553290 FCHSD1Q86WN1 690 aa14.96□□□□□ -0.01
ACTN1-207ENST00000553290 RASEFQ8IZ41 740 aa14.96□□□□□ -0.01
ACTN1-207ENST00000553290 AFG1LQ8WV93 481 aa14.96□□□□□ -0.01
ACTN1-207ENST00000553290 CUL5Q93034 780 aa14.96□□□□□ -0.01
ACTN1-207ENST00000553290 EMID1Q96A84 441 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-207ENST00000553290 STAM2O75886 525 aa14.95□□□□□ -0.02
ACTN1-207ENST00000553290 MMP3P08254 477 aa14.95□□□□□ -0.02
ACTN1-207ENST00000553290 TGFB3P10600 412 aa14.95□□□□□ -0.02
ACTN1-207ENST00000553290 CSF2RAP15509 400 aa14.95□□□□□ -0.02
ACTN1-207ENST00000553290 CASTP20810 708 aaKnown RBP14.95□□□□□ -0.02
ACTN1-207ENST00000553290 CYP2C18P33260 490 aa14.95□□□□□ -0.02
ACTN1-207ENST00000553290 LAMC2Q13753 1193 aa14.95□□□□□ -0.02
ACTN1-207ENST00000553290 DGKDQ16760 1214 aa14.95□□□□□ -0.02
ACTN1-207ENST00000553290 Q7L0L9 218 aa14.95□□□□□ -0.02
ACTN1-207ENST00000553290 DHX37Q8IY37 1157 aaKnown RBP14.95□□□□□ -0.02
ACTN1-207ENST00000553290 SMARCC2Q8TAQ2 1214 aa14.95□□□□□ -0.02
ACTN1-207ENST00000553290 NOC4LQ9BVI4 516 aaKnown RBP14.95□□□□□ -0.02
ACTN1-207ENST00000553290 MYH7BA7E2Y1 1941 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 PIK3CDO00329 1044 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 RGS20O76081 388 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 ADCK5Q3MIX3 580 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 GNPTABQ3T906 1256 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 FAM47CQ5HY64 1035 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 PSRC1Q6PGN9 363 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-207ENST00000553290 APOA5Q6Q788 366 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 TMTC3Q6ZXV5 915 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 MICU3Q86XE3 530 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 CMTR1Q8N1G2 835 aaKnown RBP14.94□□□□□ -0.02
ACTN1-207ENST00000553290 IL31RAQ8NI17 732 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.94□□□□□ -0.022e-9■■■□□ 16.8
ACTN1-207ENST00000553290 IL23AQ9NPF7 189 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 TRMT13Q9NUP7 481 aaKnown RBP14.94□□□□□ -0.02
ACTN1-207ENST00000553290 RBM28Q9NW13 759 aaKnown RBP14.94□□□□□ -0.02
ACTN1-207ENST00000553290 MTMR10Q9NXD2 777 aa14.94□□□□□ -0.02
ACTN1-207ENST00000553290 FRMPD4Q14CM0 1322 aa14.93□□□□□ -0.02
ACTN1-207ENST00000553290 REC8O95072 547 aa14.93□□□□□ -0.02
ACTN1-207ENST00000553290 TMEM240Q5SV17 173 aa14.93□□□□□ -0.02
ACTN1-207ENST00000553290 ZNF697Q5TEC3 545 aa14.93□□□□□ -0.02
ACTN1-207ENST00000553290 C16orf59Q7L2K0 433 aa14.93□□□□□ -0.02
ACTN1-207ENST00000553290 RAB11FIP4Q86YS3 637 aa14.93□□□□□ -0.02
ACTN1-207ENST00000553290 CCDC82Q8N4S0 544 aa14.93□□□□□ -0.02
ACTN1-207ENST00000553290 PPTC7Q8NI37 304 aa14.93□□□□□ -0.02
ACTN1-207ENST00000553290 KCNB2Q92953 911 aa14.93□□□□□ -0.02
ACTN1-207ENST00000553290 UMODL1Q5DID0 1318 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-207ENST00000553290 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-207ENST00000553290 MEIS2O14770 477 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 ZBTB43O43298 467 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 RCAN1P53805 252 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 CCL23P55773 120 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 MRPS9P82933 396 aaKnown RBP14.92□□□□□ -0.02
ACTN1-207ENST00000553290 CELF3Q5SZQ8 465 aaKnown RBP14.92□□□□□ -0.02
ACTN1-207ENST00000553290 MYSM1Q5VVJ2 828 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 XRRA1Q6P2D8 792 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 USP17L6PQ6QN14 398 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 SESTD1Q86VW0 696 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 RPUSD2Q8IZ73 545 aaKnown RBP14.92□□□□□ -0.02
ACTN1-207ENST00000553290 TCEANC2Q96MN5 208 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 KATNAL1Q9BW62 490 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 PSTPIP2Q9H939 334 aa14.92□□□□□ -0.02
ACTN1-207ENST00000553290 PPFIA4O75335 1185 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 GGPS1O95749 300 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 FGBP02675 491 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 ACRP10323 421 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 CYP2C9P11712 490 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 HOXD8P13378 290 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-207ENST00000553290 ICAM3P32942 547 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 HSPA4P34932 840 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 CHMP4BP1P59074 171 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 FGD1P98174 961 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 RTN1Q16799 776 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 RASIP1Q5U651 963 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 PCNX4Q63HM2 1172 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 ZNF365Q70YC5 407 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 KAT2BQ92831 832 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 SPATA33Q96N06 139 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 INPP4AQ96PE3 977 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-207ENST00000553290 WNT8AQ9H1J5 351 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 MTIF3Q9H2K0 278 aaKnown RBP14.91□□□□□ -0.02
ACTN1-207ENST00000553290 MLXIPQ9HAP2 919 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 BRPF3Q9ULD4 1205 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 NOD1Q9Y239 953 aa14.91□□□□□ -0.02
ACTN1-207ENST00000553290 COL6A3P12111 3177 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 KLF18A0A0U1RQI7 1052 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 hCG_1642624A0A1W2PR95 340 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms