RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 NFIBO00712 420 aa13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 IKBKEQ14164 716 aa13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 MBTPS1Q14703 1052 aa13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 PPP2R5BQ15173 497 aa13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 PTPROQ16827 1216 aa13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 TCEAL5Q5H9L2 206 aa13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 SIRT2Q8IXJ6 389 aa13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 FTSJ3Q8IY81 847 aaKnown RBP13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 HS6ST3Q8IZP7 471 aa13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 BANK1Q8NDB2 785 aa13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 RANBP17Q9H2T7 1088 aaKnown RBP13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 ALG13Q9NP73 1137 aaKnown RBP13.48□□□□□ -0.25
SUPT16H-202ENST00000552829 FAM186AA6NE01 2351 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 COL4A6Q14031 1691 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 KIAA1217Q5T5P2 1943 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 RALGAPA2Q2PPJ7 1873 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 KMT2EQ8IZD2 1858 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 H3BNC9 293 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 RAB11FIP3O75154 756 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 TFAP4Q01664 338 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 SMAD2Q15796 467 aaKnown RBP13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 CTC1Q2NKJ3 1217 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 EPC2Q52LR7 807 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 IER5LQ5T953 404 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 FAM117BQ6P1L5 589 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 CCDC62Q6P9F0 684 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 BTNL9Q6UXG8 535 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 CLEC4DQ8WXI8 215 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 SAMD11Q96NU1 681 aa13.47□□□□□ -0.25
SUPT16H-202ENST00000552829 ARIH2O95376 493 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 TSPY3P0CV98 308 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 TSPY8P0CW00 308 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 TXNP10599 105 aaKnown RBP13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 NOVP48745 357 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 PTPN5P54829 565 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 TCF15Q12870 199 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 RASGRP2Q7LDG7 609 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 APPBP2Q92624 585 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 EDAQ92838 391 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 CHMP4CQ96CF2 233 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 MUTYHQ9UIF7 546 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 ISY1Q9ULR0 285 aaKnown RBP13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 MYH7BA7E2Y1 1941 aa13.46□□□□□ -0.25
SUPT16H-202ENST00000552829 LGR5O75473 907 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 FOXK2Q01167 660 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 PDE4DQ08499 809 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 GPM6BQ13491 265 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 ZNF618Q5T7W0 954 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 SLC30A10Q6XR72 485 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 RNF135Q8IUD6 432 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 IFNL3Q8IZI9 196 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 AFG1LQ8WV93 481 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 WNT8BQ93098 351 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 CRBNQ96SW2 442 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 PRRX2Q99811 253 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 NSUN3Q9H649 340 aaKnown RBP13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 IL17RBQ9NRM6 502 aa13.45□□□□□ -0.26
SUPT16H-202ENST00000552829 PATL2C9JE40 543 aaKnown RBP13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 GPAA1O43292 621 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 MBTPS2O43462 519 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 NCK2O43639 380 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 NEFLP07196 543 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 MMP3P08254 477 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 GNAT2P19087 354 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 TDO2P48775 406 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 IRX6P78412 446 aaPredicted RBP13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 PDE4BQ07343 736 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 ARHGAP1Q07960 439 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 PTK7Q13308 1070 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 PPP4R3BQ5MIZ7 849 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 TTBK2Q6IQ55 1244 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 TMEM192Q8IY95 271 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 KBTBD3Q8NAB2 608 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 DNERQ8NFT8 737 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 HDAC6Q9UBN7 1215 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 PLXNA3P51805 1871 aa13.44□□□□□ -0.26
SUPT16H-202ENST00000552829 PTPDC1A2A3K4 754 aa13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 HAS3O00219 553 aa13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 CHMP4BP1P59074 171 aa13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 RPS6P62753 249 aaKnown RBP13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 DLX2Q07687 328 aaPredicted RBP13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 NBR1Q14596 966 aa13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 PKN1Q16512 942 aa13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 RNF207Q6ZRF8 634 aa13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 DBF4BQ8NFT6 615 aa13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 DCAF4Q8WV16 495 aa13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 POP1Q99575 1024 aaKnown RBP13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 CLDND1Q9NY35 253 aa13.43□□□□□ -0.26
SUPT16H-202ENST00000552829 TMEM221A6NGB7 291 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 M0R296 226 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 M0R2C6 588 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 RNF113AO15541 343 aaKnown RBP13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 NMT2O60551 498 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 GH1P01241 217 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 AMHP03971 560 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms