RNA–Protein interactions for RNA: ENST00000552628.1

LINC02396-204, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 4

Gene LINC02396, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-204ENST00000552628 PTGISQ16647 500 aa17.73■□□□□ 0.43
LINC02396-204ENST00000552628 TTBK2Q6IQ55 1244 aa17.73■□□□□ 0.43
LINC02396-204ENST00000552628 RASGRP2Q7LDG7 609 aa17.73■□□□□ 0.43
LINC02396-204ENST00000552628 CCDC155Q8N6L0 562 aa17.73■□□□□ 0.43
LINC02396-204ENST00000552628 PNMA1Q8ND90 353 aa17.73■□□□□ 0.43
LINC02396-204ENST00000552628 NCOA7Q8NI08 942 aa17.73■□□□□ 0.43
LINC02396-204ENST00000552628 MORC4Q8TE76 937 aa17.73■□□□□ 0.43
LINC02396-204ENST00000552628 COPS5Q92905 334 aa17.73■□□□□ 0.43
LINC02396-204ENST00000552628 MTA3Q9BTC8 594 aa17.73■□□□□ 0.43
LINC02396-204ENST00000552628 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
LINC02396-204ENST00000552628 FRMPD2Q68DX3 1309 aaPredicted RBP17.72■□□□□ 0.43
LINC02396-204ENST00000552628 PITPNM1O00562 1244 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 NFIBO00712 420 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 NKRFO15226 690 aaKnown RBP eCLIP17.72■□□□□ 0.43
LINC02396-204ENST00000552628 ARHGEF15O94989 841 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 PTPN11Q06124 597 aaPredicted RBP17.72■□□□□ 0.43
LINC02396-204ENST00000552628 NECTIN1Q15223 517 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 SEC23AQ15436 765 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 SYDE2Q5VT97 1194 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 TMCO2Q7Z6W1 182 aaPredicted RBP17.72■□□□□ 0.43
LINC02396-204ENST00000552628 RALYLQ86SE5 291 aaKnown RBP17.72■□□□□ 0.43
LINC02396-204ENST00000552628 SCFD2Q8WU76 684 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 UIMC1Q96RL1 719 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 ZKSCAN3Q9BRR0 538 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 RANBP17Q9H2T7 1088 aaKnown RBP17.72■□□□□ 0.43
LINC02396-204ENST00000552628 KAT14Q9H8E8 782 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 ANO2Q9NQ90 1003 aa17.72■□□□□ 0.43
LINC02396-204ENST00000552628 BAIAP3O94812 1187 aa17.71■□□□□ 0.43
LINC02396-204ENST00000552628 SSTR3P32745 418 aaPredicted RBP17.71■□□□□ 0.43
LINC02396-204ENST00000552628 STOX1Q6ZVD7 989 aa17.71■□□□□ 0.43
LINC02396-204ENST00000552628 CYB5R4Q7L1T6 521 aa17.71■□□□□ 0.43
LINC02396-204ENST00000552628 ARIH1Q9Y4X5 557 aaPredicted RBP17.71■□□□□ 0.43
LINC02396-204ENST00000552628 TAF6LQ9Y6J9 622 aa17.71■□□□□ 0.43
LINC02396-204ENST00000552628 MUC3AQ02505 3323 aa17.7■□□□□ 0.42
LINC02396-204ENST00000552628 LOC102724159A0A0B4J2E5 919 aa17.7■□□□□ 0.42
LINC02396-204ENST00000552628 RBM47A0AV96 593 aaKnown RBP17.7■□□□□ 0.42
LINC02396-204ENST00000552628 GPR37L1O60883 481 aa17.7■□□□□ 0.42
LINC02396-204ENST00000552628 PWP2Q15269 919 aaKnown RBP17.7■□□□□ 0.42
LINC02396-204ENST00000552628 ASPRV1Q53RT3 343 aa17.7■□□□□ 0.42
LINC02396-204ENST00000552628 IFIT1BQ5T764 474 aaKnown RBP17.7■□□□□ 0.42
LINC02396-204ENST00000552628 FAM117BQ6P1L5 589 aa17.7■□□□□ 0.42
LINC02396-204ENST00000552628 SLC30A10Q6XR72 485 aa17.7■□□□□ 0.42
LINC02396-204ENST00000552628 CHST3Q7LGC8 479 aa17.7■□□□□ 0.42
LINC02396-204ENST00000552628 SPRED2Q7Z698 418 aa17.7■□□□□ 0.42
LINC02396-204ENST00000552628 MB21D2Q8IYB1 491 aaPredicted RBP17.7■□□□□ 0.42
LINC02396-204ENST00000552628 GDPD5Q8WTR4 605 aa17.7■□□□□ 0.42
LINC02396-204ENST00000552628 PRRC2BQ5JSZ5 2229 aaKnown RBP17.7■□□□□ 0.42
LINC02396-204ENST00000552628 SCN5AQ14524 2016 aa17.69■□□□□ 0.42
LINC02396-204ENST00000552628 LCHNA4D1U4 455 aa17.69■□□□□ 0.42
LINC02396-204ENST00000552628 A6NJR5 290 aa17.69■□□□□ 0.42
LINC02396-204ENST00000552628 SLC27A2O14975 620 aa17.69■□□□□ 0.42
LINC02396-204ENST00000552628 SART3Q15020 963 aaKnown RBP17.69■□□□□ 0.42
LINC02396-204ENST00000552628 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
LINC02396-204ENST00000552628 CREB3L3Q68CJ9 461 aa17.69■□□□□ 0.42
LINC02396-204ENST00000552628 KHSRPQ92945 711 aaKnown RBP eCLIP17.69■□□□□ 0.42
LINC02396-204ENST00000552628 WDR19Q8NEZ3 1342 aa17.69■□□□□ 0.42
LINC02396-204ENST00000552628 CHD9Q3L8U1 2897 aa17.69■□□□□ 0.42
LINC02396-204ENST00000552628 ERICH2A1L162 156 aa17.68■□□□□ 0.42
LINC02396-204ENST00000552628 WDR5P61964 334 aaKnown RBP17.68■□□□□ 0.42
LINC02396-204ENST00000552628 RPS6P62753 249 aaKnown RBP17.68■□□□□ 0.42
LINC02396-204ENST00000552628 CSPP1Q1MSJ5 1256 aa17.68■□□□□ 0.42
LINC02396-204ENST00000552628 SEPT14Q6ZU15 432 aa17.68■□□□□ 0.42
LINC02396-204ENST00000552628 ALYREFQ86V81 257 aaKnown RBP17.68■□□□□ 0.42
LINC02396-204ENST00000552628 CAGE1Q8TC20 777 aa17.68■□□□□ 0.42
LINC02396-204ENST00000552628 AFAP1L1Q8TED9 768 aa17.68■□□□□ 0.42
LINC02396-204ENST00000552628 LMCD1Q9NZU5 365 aa17.68■□□□□ 0.42
LINC02396-204ENST00000552628 PI4K2BG5E9Z4 385 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 EPB41L2O43491 1005 aaKnown RBP17.67■□□□□ 0.42
LINC02396-204ENST00000552628 LPXNO60711 386 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 SELPP16109 830 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 TSGA10IPQ3SY00 556 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 USH1GQ495M9 461 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 EP400NLQ6ZTU2 488 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 LRRC8DQ7L1W4 858 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 GJD3Q8N144 294 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 C7orf31Q8N865 590 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 AFG1LQ8WV93 481 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 TGS1Q96RS0 853 aaKnown RBP17.67■□□□□ 0.42
LINC02396-204ENST00000552628 RAD9AQ99638 391 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 MAF1Q9H063 256 aa17.67■□□□□ 0.42
LINC02396-204ENST00000552628 IFIT3O14879 490 aaKnown RBP17.66■□□□□ 0.42
LINC02396-204ENST00000552628 PARP1P09874 1014 aaKnown RBP17.66■□□□□ 0.42
LINC02396-204ENST00000552628 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
LINC02396-204ENST00000552628 KCNA5P22460 613 aa17.66■□□□□ 0.42
LINC02396-204ENST00000552628 ANTXR2P58335 489 aa17.66■□□□□ 0.42
LINC02396-204ENST00000552628 DEFB103AP81534 67 aa17.66■□□□□ 0.42
LINC02396-204ENST00000552628 IKBKEQ14164 716 aa17.66■□□□□ 0.42
LINC02396-204ENST00000552628 GDF6Q6KF10 455 aaPredicted RBP17.66■□□□□ 0.42
LINC02396-204ENST00000552628 CNKSR3Q6P9H4 555 aa17.66■□□□□ 0.42
LINC02396-204ENST00000552628 DNERQ8NFT8 737 aa17.66■□□□□ 0.42
LINC02396-204ENST00000552628 CLEC4DQ8WXI8 215 aa17.66■□□□□ 0.42
LINC02396-204ENST00000552628 ALG1Q9BT22 464 aa17.66■□□□□ 0.42
LINC02396-204ENST00000552628 UBE2ZQ9H832 354 aaPredicted RBP17.66■□□□□ 0.42
LINC02396-204ENST00000552628 SUGCTQ9HAC7 445 aa17.66■□□□□ 0.42
LINC02396-204ENST00000552628 LRRC37A2A6NM11 1700 aa17.66■□□□□ 0.42
LINC02396-204ENST00000552628 GH1P01241 217 aa17.65■□□□□ 0.42
LINC02396-204ENST00000552628 MCM5P33992 734 aa17.65■□□□□ 0.42
LINC02396-204ENST00000552628 WTAPQ15007 396 aa17.65■□□□□ 0.42
LINC02396-204ENST00000552628 LY6KQ17RY6 165 aa17.65■□□□□ 0.42
LINC02396-204ENST00000552628 IGDCC4Q8TDY8 1250 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms