RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 ERO1AQ96HE7 468 aa11.9□□□□□ -0.5
TGFBR1-209ENST00000552516 CCDC114Q96M63 670 aa11.9□□□□□ -0.5
TGFBR1-209ENST00000552516 DPH5Q9H2P9 285 aa11.9□□□□□ -0.5
TGFBR1-209ENST00000552516 DDX4Q9NQI0 724 aaKnown RBP11.9□□□□□ -0.5
TGFBR1-209ENST00000552516 TNS2Q63HR2 1409 aa11.9□□□□□ -0.5
TGFBR1-209ENST00000552516 KCNK3O14649 394 aa11.9□□□□□ -0.51
TGFBR1-209ENST00000552516 GFPT2O94808 682 aa11.9□□□□□ -0.51
TGFBR1-209ENST00000552516 PPP1R18Q6NYC8 613 aa11.9□□□□□ -0.51
TGFBR1-209ENST00000552516 VSTM4Q8IW00 320 aa11.9□□□□□ -0.51
TGFBR1-209ENST00000552516 PPP1R13LQ8WUF5 828 aa11.9□□□□□ -0.51
TGFBR1-209ENST00000552516 PDLIM2Q96JY6 352 aa11.9□□□□□ -0.51
TGFBR1-209ENST00000552516 ZCCHC17Q9NP64 241 aaKnown RBP11.9□□□□□ -0.51
TGFBR1-209ENST00000552516 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.51
TGFBR1-209ENST00000552516 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 NCK2O43639 380 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 SFMBT2Q5VUG0 894 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 UBLCP1Q8WVY7 318 aaPredicted RBP11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 WDR24Q96S15 920 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 FAM217BQ9NTX9 383 aaPredicted RBP11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 USP20Q9Y2K6 914 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 SLC9C1Q4G0N8 1177 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 GSTA5Q7RTV2 222 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 MTMR4Q9NYA4 1195 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 JCADQ9P266 1359 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 BCL9O00512 1426 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 APBA1Q02410 837 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 KCTD16Q68DU8 428 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 ZNF746Q6NUN9 644 aaPredicted RBP11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 SND1Q7KZF4 910 aaKnown RBP eCLIP11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 VGLL2Q8N8G2 317 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 CYP2W1Q8TAV3 490 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 ATRIPQ8WXE1 791 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 IL17RBQ9NRM6 502 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 BARHL2Q9NY43 387 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 IMPACTQ9P2X3 320 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 PNMA6FA0A0J9YX94 578 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 PSMD14O00487 310 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 DPEP1P16444 411 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 C2orf54Q08AI8 447 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 ZNF658Q5TYW1 1059 aaPredicted RBP11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 ZNF772Q68DY9 489 aaPredicted RBP11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 ZBTB33Q86T24 672 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 SESTD1Q86VW0 696 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 TMTC1Q8IUR5 882 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 PKNOX2Q96KN3 472 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 CCDC94Q9BW85 323 aaPredicted RBP11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 PNPLA7Q6ZV29 1317 aa11.89□□□□□ -0.51
TGFBR1-209ENST00000552516 SLC37A4O43826 429 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 RPL13P26373 211 aaKnown RBP11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 SEPT7Q16181 437 aaKnown RBP11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 CCDC93Q567U6 631 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 CLEC17AQ6ZS10 378 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 SFR1Q86XK3 245 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 UBR1Q8IWV7 1749 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 GPATCH4Q5T3I0 446 aaKnown RBP11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 EMILIN3Q9NT22 766 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 DNAJC17Q9NVM6 304 aaKnown RBP11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 ZBTB5O15062 677 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 NDUFB10O96000 172 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 EIF4A3P38919 411 aaKnown RBP11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 HMGCS2P54868 508 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 RASA3Q14644 834 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 ALX1Q15699 326 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 DALRD3Q5D0E6 543 aaKnown RBP11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 MLXIPQ9HAP2 919 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 AGPAT5Q9NUQ2 364 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 PDHBP11177 359 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 ARHGAP4P98171 946 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 NTRK3Q16288 839 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 TCP11X2Q5H9J9 407 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 PHF20Q9BVI0 1012 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 TRPC6Q9Y210 931 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 CNTNAP5Q8WYK1 1306 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 A0A087X0B3 334 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 BUB1BO60566 1050 aaPredicted RBP11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 FXR1P51114 621 aaKnown RBP eCLIP11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 NBPF9Q3BBW0 867 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 DYDC2Q96IM9 177 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 ATP6V0A2Q9Y487 856 aa11.88□□□□□ -0.51
TGFBR1-209ENST00000552516 TTC26A0AVF1 554 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 ACTN4O43707 911 aaKnown RBP11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 PEX3P56589 373 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 ANKRD40Q6AI12 368 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 DAAM2Q86T65 1068 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 ZKSCAN4Q969J2 545 aaPredicted RBP11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 OSBPL5Q9H0X9 879 aaPredicted RBP11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 SRGAP2CP0DJJ0 459 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 ATP1A2P50993 1020 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 SH2D4AQ9H788 454 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 NMT1P30419 496 aaKnown RBP11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 GRM4Q14833 912 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 SULF1Q8IWU6 871 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 ENGASEQ8NFI3 743 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms