RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 UBE2SQ16763 222 aa21.21■□□□□ 0.99
PRPF40B-216ENST00000552301 BRDTQ58F21 947 aaPredicted RBP21.21■□□□□ 0.99
PRPF40B-216ENST00000552301 IL31RAQ8NI17 732 aa21.21■□□□□ 0.99
PRPF40B-216ENST00000552301 RIC8AQ9NPQ8 531 aa21.21■□□□□ 0.99
PRPF40B-216ENST00000552301 TPCN1Q9ULQ1 816 aa21.21■□□□□ 0.99
PRPF40B-216ENST00000552301 A0A1W2PQ45 241 aaPredicted RBP21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 A0A1W2PQY0 241 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 SMCO2A6NFE2 343 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 ACLYP53396 1101 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 BEX3Q00994 111 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 GNPTABQ3T906 1256 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 TYW1BQ6NUM6 668 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 VSIG10LQ86VR7 867 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 C7orf61Q8IZ16 206 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 CCDC148Q8NFR7 591 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 VTI1AQ96AJ9 217 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 GLT1D1Q96MS3 346 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 STARD7Q9NQZ5 370 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 FRMPD4Q14CM0 1322 aa21.2■□□□□ 0.98
PRPF40B-216ENST00000552301 KIAA1217Q5T5P2 1943 aa21.19■□□□□ 0.98
PRPF40B-216ENST00000552301 PFKFB2O60825 505 aa21.19■□□□□ 0.98
PRPF40B-216ENST00000552301 STAM2O75886 525 aa21.19■□□□□ 0.98
PRPF40B-216ENST00000552301 ASGR1P07306 291 aa21.19■□□□□ 0.98
PRPF40B-216ENST00000552301 CPT1AP50416 773 aa21.19■□□□□ 0.98
PRPF40B-216ENST00000552301 LRRC26Q2I0M4 334 aa21.19■□□□□ 0.98
PRPF40B-216ENST00000552301 TMEM63BQ5T3F8 832 aa21.19■□□□□ 0.98
PRPF40B-216ENST00000552301 PRPF38BQ5VTL8 546 aaKnown RBP21.19■□□□□ 0.98
PRPF40B-216ENST00000552301 KCNV1Q6PIU1 500 aa21.19■□□□□ 0.98
PRPF40B-216ENST00000552301 C6orf50Q9HD87 102 aa21.19■□□□□ 0.98
PRPF40B-216ENST00000552301 ALPK3Q96L96 1907 aa21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 DEXIO95424 95 aa21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 FOSP01100 380 aaPredicted RBP21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 PTGS1P23219 599 aa21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 NKX3-2P78367 333 aa21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 IRX5P78411 483 aaPredicted RBP21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 SCRN1Q12765 414 aa21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 XRRA1Q6P2D8 792 aa21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 SLC39A5Q6ZMH5 540 aa21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 PCDHA6Q9UN73 950 aa21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 PCDHA8Q9Y5H6 950 aa21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 MKI67P46013 3256 aaKnown RBP21.18■□□□□ 0.98
PRPF40B-216ENST00000552301 ESYT2A0FGR8 921 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 ARIH2O95376 493 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 GH1P01241 217 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 GNA11P29992 359 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 RBM25P49756 843 aaKnown RBP21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 RTP1P59025 263 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 AP3B2Q13367 1082 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 PKN1Q16512 942 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 PCNX4Q63HM2 1172 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 CCSAPQ6IQ19 270 aaPredicted RBP21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 CCDC62Q6P9F0 684 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 COPS5Q92905 334 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 ATP11BQ9Y2G3 1177 aa21.17■□□□□ 0.98
PRPF40B-216ENST00000552301 CTAGE5O15320 804 aa21.16■□□□□ 0.98
PRPF40B-216ENST00000552301 CABYRO75952 493 aa21.16■□□□□ 0.98
PRPF40B-216ENST00000552301 LY6KQ17RY6 165 aa21.16■□□□□ 0.98
PRPF40B-216ENST00000552301 NLRX1Q86UT6 975 aa21.16■□□□□ 0.98
PRPF40B-216ENST00000552301 BICD2Q8TD16 824 aa21.16■□□□□ 0.98
PRPF40B-216ENST00000552301 ZFP91Q96JP5 570 aaPredicted RBP21.16■□□□□ 0.98
PRPF40B-216ENST00000552301 ANO3Q9BYT9 981 aa21.16■□□□□ 0.98
PRPF40B-216ENST00000552301 POLR3EQ9NVU0 708 aa21.16■□□□□ 0.98
PRPF40B-216ENST00000552301 VPS54Q9P1Q0 977 aa21.16■□□□□ 0.98
PRPF40B-216ENST00000552301 DDX41Q9UJV9 622 aaKnown RBP21.16■□□□□ 0.98
PRPF40B-216ENST00000552301 ELP1O95163 1332 aa21.15■□□□□ 0.98
PRPF40B-216ENST00000552301 H0YGN5 161 aa21.15■□□□□ 0.98
PRPF40B-216ENST00000552301 MYL3P08590 195 aa21.15■□□□□ 0.98
PRPF40B-216ENST00000552301 CXCL17Q6UXB2 119 aa21.15■□□□□ 0.98
PRPF40B-216ENST00000552301 REXO1Q8N1G1 1221 aaKnown RBP21.15■□□□□ 0.98
PRPF40B-216ENST00000552301 ZMYND12Q9H0C1 365 aa21.15■□□□□ 0.98
PRPF40B-216ENST00000552301 SH3GLB2Q9NR46 395 aa21.15■□□□□ 0.98
PRPF40B-216ENST00000552301 RTEL1Q9NZ71 1219 aa21.15■□□□□ 0.98
PRPF40B-216ENST00000552301 CEP290O15078 2479 aa21.14■□□□□ 0.98
PRPF40B-216ENST00000552301 STK36Q9NRP7 1315 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 A0A0U1RQG5 324 aaPredicted RBP21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 FIBPO43427 364 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 TGFB3P10600 412 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 NLRP5P59047 1200 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 MRPS9P82933 396 aaKnown RBP21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 SNX17Q15036 470 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 RABEP1Q15276 862 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 ME3Q16798 604 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 TRIM60Q495X7 471 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 JAKMIP3Q5VZ66 844 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 MCTP2Q6DN12 878 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 DHX37Q8IY37 1157 aaKnown RBP21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 GTF3C6Q969F1 213 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 INPP4AQ96PE3 977 aaPredicted RBP21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 PRKAG2Q9UGJ0 569 aa21.14■□□□□ 0.97
PRPF40B-216ENST00000552301 KPNA6O60684 536 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 RGS20O76081 388 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 XBP1P17861 261 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 ARHGAP1Q07960 439 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 LAMC2Q13753 1193 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 C1orf53Q5VUE5 145 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 NECAB1Q8N987 351 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 AFG1LQ8WV93 481 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 CDHR1Q96JP9 859 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 PGBD1Q96JS3 809 aa21.13■□□□□ 0.97
PRPF40B-216ENST00000552301 TMEM260Q9NX78 707 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms