RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 DYDC2Q96IM9 177 aa9.15□□□□□ -0.94
CHPT1-208ENST00000552215 RBSNQ9H1K0 784 aa9.15□□□□□ -0.94
CHPT1-208ENST00000552215 PRR29P0C7W0 189 aa9.15□□□□□ -0.95
CHPT1-208ENST00000552215 DSG3P32926 999 aa9.15□□□□□ -0.95
CHPT1-208ENST00000552215 FAM177A1Q8N128 213 aaPredicted RBP9.15□□□□□ -0.95
CHPT1-208ENST00000552215 ZC3H15Q8WU90 426 aaKnown RBP9.15□□□□□ -0.95
CHPT1-208ENST00000552215 LENG1Q96BZ8 264 aaPredicted RBP9.15□□□□□ -0.95
CHPT1-208ENST00000552215 GMCL1Q96IK5 515 aa9.15□□□□□ -0.95
CHPT1-208ENST00000552215 TEKT3Q9BXF9 490 aa9.15□□□□□ -0.95
CHPT1-208ENST00000552215 TXNRD2Q9NNW7 524 aa9.15□□□□□ -0.95
CHPT1-208ENST00000552215 A1CFQ9NQ94 594 aaKnown RBP9.15□□□□□ -0.95
CHPT1-208ENST00000552215 ANO10Q9NW15 660 aa9.15□□□□□ -0.95
CHPT1-208ENST00000552215 BTBD7Q9P203 1132 aa9.15□□□□□ -0.95
CHPT1-208ENST00000552215 CTNND2Q9UQB3 1225 aa9.15□□□□□ -0.95
CHPT1-208ENST00000552215 ELP1O95163 1332 aa9.15□□□□□ -0.95
CHPT1-208ENST00000552215 BMP15O95972 392 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 FOSP01100 380 aaPredicted RBP9.14□□□□□ -0.95
CHPT1-208ENST00000552215 ICAM1P05362 532 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 TXNP10599 105 aaKnown RBP9.14□□□□□ -0.95
CHPT1-208ENST00000552215 PPATQ06203 517 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 STXBP2Q15833 593 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 CEP135Q66GS9 1140 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 PDXDC2PQ6P474 469 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 TRIM50Q86XT4 487 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 MTMR14Q8NCE2 650 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 ZMYND12Q9H0C1 365 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 SCN7AQ01118 1682 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 CSDE1O75534 798 aaKnown RBP9.14□□□□□ -0.95
CHPT1-208ENST00000552215 SOX10P56693 466 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 POSTNQ15063 836 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 LY6KQ17RY6 165 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 CEP55Q53EZ4 464 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 PLA2G4FQ68DD2 849 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 FERMT2Q96AC1 680 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 POLR3EQ9NVU0 708 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 ADD3Q9UEY8 706 aaKnown RBP9.14□□□□□ -0.95
CHPT1-208ENST00000552215 USP20Q9Y2K6 914 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 R3HCC1Q9Y3T6 440 aaKnown RBP9.14□□□□□ -0.95
CHPT1-208ENST00000552215 GOLGA6L6A8MZA4 724 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 FAM86B1E9PN63 330 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 FAM86B2P0C5J1 330 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 CCND2P30279 289 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 NPEPPSP55786 919 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 FUT2Q10981 343 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 GMCL1P1Q8NEA9 526 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 ANKRD20A12PQ8NF67 263 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 SYTL5Q8TDW5 730 aaPredicted RBP9.14□□□□□ -0.95
CHPT1-208ENST00000552215 BRI3BPQ8WY22 251 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 BCAS3Q9H6U6 928 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 GABBR1Q9UBS5 961 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 AFG3L2Q9Y4W6 797 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 COL4A5P29400 1685 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 TMEM88BA6NKF7 163 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 GCNT3O95395 438 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 GGPS1O95749 300 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 FGRP09769 529 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 SRGAP2CP0DJJ0 459 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 MTIF2P46199 727 aaKnown RBP9.14□□□□□ -0.95
CHPT1-208ENST00000552215 CATSPERGQ6ZRH7 1159 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 RAET1EQ8TD07 263 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 ZNF592Q92610 1267 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 CEP170P1Q96L14 293 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 CAPNS2Q96L46 248 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 PARK7Q99497 189 aaKnown RBP9.14□□□□□ -0.95
CHPT1-208ENST00000552215 NUDT12Q9BQG2 462 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 TMX1Q9H3N1 280 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 KCNH7Q9NS40 1196 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 ANKRD36CQ5JPF3 1778 aa9.14□□□□□ -0.95
CHPT1-208ENST00000552215 STK36Q9NRP7 1315 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 B4DLN1 442 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 C6orf222P0C671 652 aaPredicted RBP9.13□□□□□ -0.95
CHPT1-208ENST00000552215 USP8P40818 1118 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 PSMC4P43686 418 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 OSTNP61366 133 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 AMPD3Q01432 767 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 CUL4BQ13620 913 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 CCDC40Q4G0X9 1142 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 KSR1Q8IVT5 923 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 MRPL44Q9H9J2 332 aaKnown RBP9.13□□□□□ -0.95
CHPT1-208ENST00000552215 ZFYVE28Q9HCC9 887 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 LRRIQ4A6NIV6 560 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 CMA1P23946 247 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 ARID5AQ03989 594 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 CST9Q5W186 159 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 ZNF784Q8NCA9 323 aaPredicted RBP9.13□□□□□ -0.95
CHPT1-208ENST00000552215 MTA3Q9BTC8 594 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 GLT8D2Q9H1C3 349 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 PPP2R3BQ9Y5P8 575 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 SNED1Q8TER0 1413 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 SCN9AQ15858 1988 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 MYL3P08590 195 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 ELNP15502 786 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 U2AF2P26368 475 aaKnown RBP eCLIP9.13□□□□□ -0.952e-7■■□□□ 12.8
CHPT1-208ENST00000552215 ADORA2AP29274 412 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 FSTL1Q12841 308 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 DPCR1Q3MIW9 517 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 MKL1Q969V6 931 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 SHISA4Q96DD7 197 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 SPATA33Q96N06 139 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 PCDH10Q9P2E7 1040 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms