RNA–Protein interactions for RNA: ENST00000551681.1

RRN3P1-203, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene RRN3P1, Length 1,151 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-203ENST00000551681 PCDHA4Q9UN74 947 aa11.11□□□□□ -0.63
RRN3P1-203ENST00000551681 KIAA1217Q5T5P2 1943 aa11.11□□□□□ -0.63
RRN3P1-203ENST00000551681 MAFGO15525 162 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 FARP2O94887 1054 aaPredicted RBP11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 MYCLP12524 364 aaPredicted RBP11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 CPT1AP50416 773 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 DUSP28Q4G0W2 176 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 USP17L6PQ6QN14 398 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 NECAB2Q7Z6G3 386 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 CCDC83Q8IWF9 413 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 FBXO16Q8IX29 292 aaPredicted RBP11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 NECAB1Q8N987 351 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 DAGLBQ8NCG7 672 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 NSUN7Q8NE18 718 aaKnown RBP11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 TBC1D5Q92609 795 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 NAP1L4Q99733 375 aaKnown RBP11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 ALG1Q9BT22 464 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 HTATIP2Q9BUP3 242 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 WDR11Q9BZH6 1224 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 VPS54Q9P1Q0 977 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 COL20A1Q9P218 1284 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 PCDHA6Q9UN73 950 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 PCDHA8Q9Y5H6 950 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
RRN3P1-203ENST00000551681 ASTN1O14525 1302 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 RBM47A0AV96 593 aaKnown RBP11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 MOXD2PA6NHM9 499 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 FIBPO43427 364 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 KPNA6O60684 536 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 ZNF76P36508 570 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 SREBF1P36956 1147 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 SETQ01105 290 aaPredicted RBP11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 PRAMEF19Q5SWL8 479 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 EEPD1Q7L9B9 569 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 KRT25Q7Z3Z0 450 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 TLK2Q86UE8 772 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 HSCBQ8IWL3 235 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 BLIDQ8IZY5 108 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 TRPV1Q8NER1 839 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 GPRASP2Q96D09 838 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 TMX3Q96JJ7 454 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 TSEN34Q9BSV6 310 aaKnown RBP11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 SEZ6LQ9BYH1 1024 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 ANO3Q9BYT9 981 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 KATNBL1Q9H079 304 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 TCEAL9Q9UHQ7 104 aa11.09□□□□□ -0.63
RRN3P1-203ENST00000551681 CCDC194A0A1B0GVG4 234 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 CABYRO75952 493 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 LARGE1O95461 756 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 GH1P01241 217 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 C6orf222P0C671 652 aaPredicted RBP11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 TXNP10599 105 aaKnown RBP11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 CST5P28325 142 aaPredicted RBP11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 KRT2P35908 639 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 ADCYAP1R1P41586 468 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 CLK2P49760 499 aaKnown RBP11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 GJA9P57773 515 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 NEDD9Q14511 834 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 UBE2SQ16763 222 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 LHX8Q68G74 356 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 TYW1BQ6NUM6 668 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 TAPT1Q6NXT6 567 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 SEPT14Q6ZU15 432 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 NIPA1Q7RTP0 329 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 INPP4AQ96PE3 977 aaPredicted RBP11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 PURBQ96QR8 312 aaKnown RBP11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 BRCA2P51587 3418 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 SYNRGQ9UMZ2 1314 aa11.08□□□□□ -0.64
RRN3P1-203ENST00000551681 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 CTDNEP1O95476 244 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 PDIA4P13667 645 aaKnown RBP11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 PDCP20941 246 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 ICAM3P32942 547 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 USP11P51784 963 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 NKX3-2P78367 333 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 ARHGAP4P98171 946 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 MTMR1Q13613 665 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 LAMC2Q13753 1193 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 GNL2Q13823 731 aaKnown RBP11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 NONOQ15233 471 aaKnown RBP eCLIP11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 OR6J1Q8NGC5 347 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 EMID1Q96A84 441 aaPredicted RBP11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 C8orf76Q96K31 380 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 GLT1D1Q96MS3 346 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 SENP7Q9BQF6 1050 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 PHF20Q9BVI0 1012 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 UPF3AQ9H1J1 476 aaKnown RBP11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 POLR3EQ9NVU0 708 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 SMC3Q9UQE7 1217 aa11.07□□□□□ -0.64
RRN3P1-203ENST00000551681 K7ELQ4 463 aaPredicted RBP11.06□□□□□ -0.64
RRN3P1-203ENST00000551681 NOP56O00567 594 aaKnown RBP11.06□□□□□ -0.64
RRN3P1-203ENST00000551681 PPFIA3O75145 1194 aa11.06□□□□□ -0.64
RRN3P1-203ENST00000551681 ADAMTS4O75173 837 aa11.06□□□□□ -0.64
RRN3P1-203ENST00000551681 HSP90AA1P07900 732 aaKnown RBP11.06□□□□□ -0.64
RRN3P1-203ENST00000551681 CYP3A4P08684 503 aa11.06□□□□□ -0.64
RRN3P1-203ENST00000551681 GCFC2P16383 781 aaKnown RBP11.06□□□□□ -0.64
RRN3P1-203ENST00000551681 SMPD1P17405 629 aa11.06□□□□□ -0.64
RRN3P1-203ENST00000551681 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
RRN3P1-203ENST00000551681 LRRC41Q15345 812 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms