RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	PQBP1	O60828	265 aa	Known RBP	10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	RFC2	P35250	354 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	FPGS	Q05932	587 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	BFSP2	Q13515	415 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	NLRX1	Q86UT6	975 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	STAG2	Q8N3U4	1231 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	OR6J1	Q8NGC5	347 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	SMARCC2	Q8TAQ2	1214 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	SENP7	Q9BQF6	1050 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	PSTPIP2	Q9H939	334 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	PXMP2	Q9NR77	195 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	MRVI1	Q9Y6F6	885 aa		10.42	□□□□□ -0.74
ATXN2-223	ENST00000551551	SH2B2	O14492	632 aa	Predicted RBP	10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	ZBTB43	O43298	467 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	GNAT1	P11488	350 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	SYN1	P17600	705 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	SMAD3	P84022	425 aa	Known RBP	10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	AKAP17A	Q02040	695 aa	Known RBP	10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	FAAP100	Q0VG06	881 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	CCDC62	Q6P9F0	684 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	CPLX2	Q6PUV4	134 aa	Known RBP	10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	EEPD1	Q7L9B9	569 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	SESTD1	Q86VW0	696 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	HOMER1	Q86YM7	354 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	FBXO16	Q8IX29	292 aa	Predicted RBP	10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	DHX37	Q8IY37	1157 aa	Known RBP	10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	RETREG2	Q8NC44	543 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	PPTC7	Q8NI37	304 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	TAAR1	Q96RJ0	339 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	USP26	Q9BXU7	913 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	PDLIM7	Q9NR12	457 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	LAMA4	Q16363	1823 aa		10.41	□□□□□ -0.74
ATXN2-223	ENST00000551551	SMCHD1	A6NHR9	2005 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	SPDYE3	A6NKU9	549 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	CD4	P01730	458 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	ACTN1	P12814	892 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	HSPA4	P34932	840 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	PURA	Q00577	322 aa	Known RBP	10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	MDM2	Q00987	491 aa	Predicted RBP	10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	EXOSC10	Q01780	885 aa	Known RBP	10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	PPP1R18	Q6NYC8	613 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	BLOC1S2	Q6QNY1	142 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	SLC30A10	Q6XR72	485 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	SEPT14	Q6ZU15	432 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	FAM126B	Q8IXS8	530 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	CAGE1	Q8TC20	777 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	BICD2	Q8TD16	824 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	KCNB2	Q92953	911 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	PIGS	Q96S52	555 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	PDCD2L	Q9BRP1	358 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	IL25	Q9H293	177 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	MLXIP	Q9HAP2	919 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	DDX41	Q9UJV9	622 aa	Known RBP	10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	NOD1	Q9Y239	953 aa		10.4	□□□□□ -0.74
ATXN2-223	ENST00000551551	FIBP	O43427	364 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	EFCAB14	O75071	495 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	GNA11	P29992	359 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	ICAM3	P32942	547 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	PGM5	Q15124	567 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	RTN1	Q16799	776 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	PCNX4	Q63HM2	1172 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	APOA5	Q6Q788	366 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	CXCL17	Q6UXB2	119 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	BAD	Q92934	168 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	C22orf23	Q9BZE7	217 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	TM6SF1	Q9BZW5	370 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	ZMYND15	Q9H091	742 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	HIPK3	Q9H422	1215 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	PDGFC	Q9NRA1	345 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	TBX21	Q9UL17	535 aa		10.39	□□□□□ -0.75
ATXN2-223	ENST00000551551	ASTN1	O14525	1302 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	TRIM43B	A6NCK2	446 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	NOP56	O00567	594 aa	Known RBP	10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	CTAGE5	O15320	804 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	CYTH3	O43739	400 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	FGB	P02675	491 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	MYL3	P08590	195 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	MYCL	P12524	364 aa	Predicted RBP	10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	ANTXR2	P58335	489 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	ANKRD1	Q15327	319 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	CELF3	Q5SZQ8	465 aa	Known RBP	10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	CHST3	Q7LGC8	479 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	C7orf31	Q8N865	590 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	GPRASP2	Q96D09	838 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	ZNF215	Q9UL58	517 aa	Predicted RBP	10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	CYP46A1	Q9Y6A2	500 aa		10.38	□□□□□ -0.75
ATXN2-223	ENST00000551551	SPATA31C2	B4DYI2	1134 aa		10.37	□□□□□ -0.75
ATXN2-223	ENST00000551551	CAND2	O75155	1236 aa		10.37	□□□□□ -0.75
ATXN2-223	ENST00000551551	XBP1	P17861	261 aa		10.37	□□□□□ -0.75
ATXN2-223	ENST00000551551	EIF2AK2	P19525	551 aa	Known RBP	10.37	□□□□□ -0.75
ATXN2-223	ENST00000551551	ANAPC15	P60006	121 aa		10.37	□□□□□ -0.75
ATXN2-223	ENST00000551551	BEX3	Q00994	111 aa		10.37	□□□□□ -0.75
ATXN2-223	ENST00000551551	AP3B2	Q13367	1082 aa		10.37	□□□□□ -0.75
ATXN2-223	ENST00000551551	MYSM1	Q5VVJ2	828 aa		10.37	□□□□□ -0.75

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