RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 TBC1D10CQ8IV04 446 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 AMOTL1Q8IY63 956 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 MB21D2Q8IYB1 491 aaPredicted RBP7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 GOLGA6L1Q8N7Z2 621 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 SHISA4Q96DD7 197 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 INTS4Q96HW7 963 aaKnown RBP7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 TMX3Q96JJ7 454 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 MTA3Q9BTC8 594 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 CRISPLD1Q9H336 500 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 SH2B1Q9NRF2 756 aaPredicted RBP7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 MCM9Q9NXL9 1143 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 PI4KBQ9UBF8 816 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 ARPP21Q9UBL0 812 aaPredicted RBP7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 MKL2Q9ULH7 1088 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 RPTORQ8N122 1335 aa7.21□□□□□ -1.26
DEPDC4-209ENST00000550587 A0A0C4DFX4 3053 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 MGAMO43451 1857 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 C19orf81C9J6K1 198 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 ORC4O43929 436 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 ADAM23O75077 832 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 POLR3DP05423 398 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 HLA-DOAP06340 250 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 ASNSP08243 561 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 HOXB4P17483 251 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 CAP2P40123 477 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 HMGCS2P54868 508 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 EVCP57679 992 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 PDE4BQ07343 736 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 TOB2Q14106 344 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 FOXP4Q8IVH2 680 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 MAPKAPK5Q8IW41 473 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 PLPP7Q8NBV4 271 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 GTF3C2Q8WUA4 911 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 ZNF274Q96GC6 653 aaPredicted RBP7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 PAWRQ96IZ0 340 aaKnown RBP7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 TMEM87BQ96K49 555 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 ZCCHC2Q9C0B9 1178 aaKnown RBP7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 INCENPQ9NQS7 918 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 GINM1Q9NU53 330 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 DNAAF2Q9NVR5 837 aaKnown RBP7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 ZSWIM5Q9P217 1185 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 SERTAD1Q9UHV2 236 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 TACC3Q9Y6A5 838 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 ZSWIM8A7E2V4 1837 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 FOCADQ5VW36 1801 aa7.2□□□□□ -1.26
DEPDC4-209ENST00000550587 MYH1P12882 1939 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 CYP2D7A0A087X1C5 515 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 B4E1Z4 1266 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L10C9JJH3 530 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 PRC1O43663 620 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 HSP90AA1P07900 732 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 ATP4AP20648 1035 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 AMPD1P23109 780 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 MAPK4P31152 587 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 LIFRP42702 1097 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 ANTXR2P58335 489 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 FGD1P98174 961 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 ME3Q16798 604 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 CYB5R4Q7L1T6 521 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 UBE2Q1Q7Z7E8 422 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 TTC6Q86TZ1 520 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 TMTC2Q8N394 836 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 GPRC5AQ8NFJ5 357 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 IGDCC4Q8TDY8 1250 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 SOCS4Q8WXH5 440 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 ESR2Q92731 530 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 CHMP4CQ96CF2 233 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 TCEANC2Q96MN5 208 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 ASCC2Q9H1I8 757 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 SUV39H2Q9H5I1 410 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 ZNF287Q9HBT7 754 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 DDX4Q9NQI0 724 aaKnown RBP7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 PAK6Q9NQU5 681 aaPredicted RBP7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 TPCN1Q9ULQ1 816 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 FLT1P17948 1338 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 NEDD4P46934 1319 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 ATRNL1Q5VV63 1379 aa7.19□□□□□ -1.26
DEPDC4-209ENST00000550587 DOCK1Q14185 1865 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 SMIM22K7EJ46 135 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 PFKFB2O60825 505 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 CYP2D6P10635 497 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 BMP8BP34820 402 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 DDIT3P35638 169 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 PLCD1P51178 756 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 SMTNP53814 917 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 BACE1P56817 501 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 CCNA1P78396 465 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 SART3Q15020 963 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 CCDC178Q5BJE1 867 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 TREML2Q5T2D2 321 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 LINC00114Q6XXX2 140 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 C16orf86Q6ZW13 317 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 NOL8Q76FK4 1167 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 CHST3Q7LGC8 479 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 SGMS1Q86VZ5 419 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 C7orf61Q8IZ16 206 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 BRF1Q92994 677 aa7.18□□□□□ -1.26
DEPDC4-209ENST00000550587 WDR18Q9BV38 432 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms