RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 GJA10Q969M2 543 aa13.7□□□□□ -0.22
CACNB3-213ENST00000550064 ZFP91Q96JP5 570 aaPredicted RBP13.7□□□□□ -0.22
CACNB3-213ENST00000550064 AK8Q96MA6 479 aa13.7□□□□□ -0.22
CACNB3-213ENST00000550064 RMDN3Q96TC7 470 aa13.7□□□□□ -0.22
CACNB3-213ENST00000550064 TTC12Q9H892 705 aaPredicted RBP13.7□□□□□ -0.22
CACNB3-213ENST00000550064 A1CFQ9NQ94 594 aaKnown RBP13.7□□□□□ -0.22
CACNB3-213ENST00000550064 CYP39A1Q9NYL5 469 aa13.7□□□□□ -0.22
CACNB3-213ENST00000550064 SERTAD1Q9UHV2 236 aa13.7□□□□□ -0.22
CACNB3-213ENST00000550064 TESPA1A2RU30 521 aaPredicted RBP13.69□□□□□ -0.22
CACNB3-213ENST00000550064 TBX3O15119 743 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 MSH4O15457 936 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 ACTN4O43707 911 aaKnown RBP13.69□□□□□ -0.22
CACNB3-213ENST00000550064 EIF2AK2P19525 551 aaKnown RBP13.69□□□□□ -0.22
CACNB3-213ENST00000550064 UBA7P41226 1012 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 PDIA5Q14554 519 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 CEP55Q53EZ4 464 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 PCNX4Q63HM2 1172 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 NCAPG2Q86XI2 1143 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 PLA2G4DQ86XP0 818 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 SLFN12Q8IYM2 578 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 FAM43AQ8N2R8 423 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 CNNM3Q8NE01 707 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 GTF3C2Q8WUA4 911 aaPredicted RBP13.69□□□□□ -0.22
CACNB3-213ENST00000550064 DHX58Q96C10 678 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 PTPN18Q99952 460 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 MXRA8Q9BRK3 442 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 CCSER1Q9C0I3 900 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 R3HDMLQ9H3Y0 253 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 PXMP2Q9NR77 195 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 LRWD1Q9UFC0 647 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 FBXO40Q9UH90 709 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 PCDHA12Q9UN75 941 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 TLL2Q9Y6L7 1015 aa13.69□□□□□ -0.22
CACNB3-213ENST00000550064 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-213ENST00000550064 MEIS1O00470 390 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 SLC25A27O95847 323 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 ERCC3P19447 782 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 TXLNAP40222 546 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 MRPS9P82933 396 aaKnown RBP13.68□□□□□ -0.22
CACNB3-213ENST00000550064 KARSQ15046 597 aaKnown RBP13.68□□□□□ -0.22
CACNB3-213ENST00000550064 PGM5Q15124 567 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 ARHGEF16Q5VV41 709 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 CABP7Q86V35 215 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 ANKRD35Q8N283 1001 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-213ENST00000550064 FAM20AQ96MK3 541 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 PDCD2LQ9BRP1 358 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 FUCA2Q9BTY2 467 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 MMTAG2Q9BU76 263 aaKnown RBP13.68□□□□□ -0.22
CACNB3-213ENST00000550064 TSPY26PQ9H489 355 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 LCTP09848 1927 aa13.68□□□□□ -0.22
CACNB3-213ENST00000550064 POTEMA6NI47 508 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 FOXN1O15353 648 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 TOMM70O94826 608 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 SLC10A3P09131 477 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 ARP10275 920 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 MYCLP12524 364 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-213ENST00000550064 COPB2P35606 906 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 ERVK-9P63128 1117 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 ERVK-24P63145 666 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 MDM2Q00987 491 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-213ENST00000550064 E2F4Q16254 413 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 ELOA2Q8IYF1 753 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-213ENST00000550064 IQUBQ8NA54 791 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 NSUN6Q8TEA1 469 aaKnown RBP13.67□□□□□ -0.22
CACNB3-213ENST00000550064 ERCC4Q92889 916 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-213ENST00000550064 SLC5A5Q92911 643 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 PYM1Q9BRP8 204 aaKnown RBP13.67□□□□□ -0.22
CACNB3-213ENST00000550064 RAB34Q9BZG1 259 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 CCDC39Q9UFE4 941 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 USP25Q9UHP3 1055 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 UBIAD1Q9Y5Z9 338 aa13.67□□□□□ -0.22
CACNB3-213ENST00000550064 PFASO15067 1338 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 FSD2A1L4K1 749 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 GOLGA6L3A6NEY3 463 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 MANSC4A6NHS7 340 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-213ENST00000550064 NR3C2P08235 984 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 SLFN14P0C7P3 912 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 ITGB5P18084 799 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 GCLCP48506 637 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-213ENST00000550064 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-213ENST00000550064 PNOCQ13519 176 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 ZRSR1Q15695 479 aaKnown RBP13.66□□□□□ -0.22
CACNB3-213ENST00000550064 RRAGBQ5VZM2 374 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 KANK3Q6NY19 840 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 XRRA1Q6P2D8 792 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 PDXDC2PQ6P474 469 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.66□□□□□ -0.22
CACNB3-213ENST00000550064 NIPA1Q7RTP0 329 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 VSIG10LQ86VR7 867 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 SHCBP1Q8NEM2 672 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 GPRC5AQ8NFJ5 357 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 RASSF8Q8NHQ8 419 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 PAGE5Q96GU1 130 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 PLIN2Q99541 437 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 MROH8Q9H579 483 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 DISC1Q9NRI5 854 aa13.66□□□□□ -0.22
CACNB3-213ENST00000550064 ZNFX1Q9P2E3 1918 aaKnown RBP13.65□□□□□ -0.22
CACNB3-213ENST00000550064 TMEM88BA6NKF7 163 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms