RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 PKP1Q13835 747 aa24.17■■□□□ 1.46
VPS29-206ENST00000549578 STXBP2Q15833 593 aa24.17■■□□□ 1.46
VPS29-206ENST00000549578 PKN2Q16513 984 aaKnown RBP24.17■■□□□ 1.46
VPS29-206ENST00000549578 PRAMEF19Q5SWL8 479 aa24.17■■□□□ 1.46
VPS29-206ENST00000549578 FERMT3Q86UX7 667 aa24.17■■□□□ 1.46
VPS29-206ENST00000549578 NOSTRINQ8IVI9 506 aa24.17■■□□□ 1.46
VPS29-206ENST00000549578 FBXO16Q8IX29 292 aaPredicted RBP24.17■■□□□ 1.46
VPS29-206ENST00000549578 CRYGNQ8WXF5 182 aa24.17■■□□□ 1.46
VPS29-206ENST00000549578 RTEL1Q9NZ71 1219 aa24.16■■□□□ 1.46
VPS29-206ENST00000549578 CNPY2Q9Y2B0 182 aa24.16■■□□□ 1.46
VPS29-206ENST00000549578 EDIL3O43854 480 aa24.15■■□□□ 1.46
VPS29-206ENST00000549578 INHAP05111 366 aa24.15■■□□□ 1.46
VPS29-206ENST00000549578 SLC9C1Q4G0N8 1177 aa24.15■■□□□ 1.46
VPS29-206ENST00000549578 KATNBL1Q9H079 304 aa24.15■■□□□ 1.46
VPS29-206ENST00000549578 EIF3JO75822 258 aaKnown RBP24.15■■□□□ 1.46
VPS29-206ENST00000549578 PRKAR2AP13861 404 aaKnown RBP24.15■■□□□ 1.46
VPS29-206ENST00000549578 CACNB2Q08289 660 aaPredicted RBP24.15■■□□□ 1.46
VPS29-206ENST00000549578 FOXD4L5Q5VV16 416 aaPredicted RBP24.15■■□□□ 1.46
VPS29-206ENST00000549578 XRRA1Q6P2D8 792 aa24.15■■□□□ 1.46
VPS29-206ENST00000549578 FOXD4L4Q8WXT5 416 aaPredicted RBP24.15■■□□□ 1.46
VPS29-206ENST00000549578 ABHD16BQ9H3Z7 469 aa24.15■■□□□ 1.46
VPS29-206ENST00000549578 ZHX1Q9UKY1 873 aaPredicted RBP24.15■■□□□ 1.46
VPS29-206ENST00000549578 RGS20O76081 388 aa24.14■■□□□ 1.45
VPS29-206ENST00000549578 CYP3A4P08684 503 aa24.14■■□□□ 1.45
VPS29-206ENST00000549578 ACVR2BQ13705 512 aa24.14■■□□□ 1.45
VPS29-206ENST00000549578 NEK8Q86SG6 692 aa24.14■■□□□ 1.45
VPS29-206ENST00000549578 TRPV1Q8NER1 839 aa24.14■■□□□ 1.45
VPS29-206ENST00000549578 IPO9Q96P70 1041 aaKnown RBP24.14■■□□□ 1.45
VPS29-206ENST00000549578 CYBAP13498 195 aa24.13■■□□□ 1.45
VPS29-206ENST00000549578 ITGB5P18084 799 aa24.13■■□□□ 1.45
VPS29-206ENST00000549578 ZNF76P36508 570 aa24.13■■□□□ 1.45
VPS29-206ENST00000549578 LETM2Q2VYF4 491 aa24.13■■□□□ 1.45
VPS29-206ENST00000549578 SEPT14Q6ZU15 432 aa24.13■■□□□ 1.45
VPS29-206ENST00000549578 CYP2W1Q8TAV3 490 aa24.13■■□□□ 1.45
VPS29-206ENST00000549578 VTA1Q9NP79 307 aa24.13■■□□□ 1.45
VPS29-206ENST00000549578 PDGFCQ9NRA1 345 aa24.13■■□□□ 1.45
VPS29-206ENST00000549578 FAM86B1E9PN63 330 aa24.12■■□□□ 1.45
VPS29-206ENST00000549578 FAM86B2P0C5J1 330 aa24.12■■□□□ 1.45
VPS29-206ENST00000549578 ZNF865P0CJ78 1059 aaPredicted RBP24.12■■□□□ 1.45
VPS29-206ENST00000549578 USP11P51784 963 aa24.12■■□□□ 1.45
VPS29-206ENST00000549578 RESTQ13127 1097 aa24.12■■□□□ 1.45
VPS29-206ENST00000549578 MAP3K21Q5TCX8 1036 aa24.12■■□□□ 1.45
VPS29-206ENST00000549578 INPP4AQ96PE3 977 aaPredicted RBP24.12■■□□□ 1.45
VPS29-206ENST00000549578 MCOLN1Q9GZU1 580 aa24.12■■□□□ 1.45
VPS29-206ENST00000549578 UBIAD1Q9Y5Z9 338 aa24.12■■□□□ 1.45
VPS29-206ENST00000549578 WNT7AO00755 349 aa24.11■■□□□ 1.45
VPS29-206ENST00000549578 STAM2O75886 525 aa24.11■■□□□ 1.45
VPS29-206ENST00000549578 TDP2O95551 362 aa24.11■■□□□ 1.45
VPS29-206ENST00000549578 ZSCAN22P10073 491 aaPredicted RBP24.11■■□□□ 1.45
VPS29-206ENST00000549578 ATP2B1P20020 1258 aa24.11■■□□□ 1.45
VPS29-206ENST00000549578 DDIT3P35638 169 aa24.11■■□□□ 1.45
VPS29-206ENST00000549578 CEP55Q53EZ4 464 aa24.11■■□□□ 1.45
VPS29-206ENST00000549578 TAPT1Q6NXT6 567 aa24.11■■□□□ 1.45
VPS29-206ENST00000549578 MXRA8Q9BRK3 442 aa24.11■■□□□ 1.45
VPS29-206ENST00000549578 WDR11Q9BZH6 1224 aa24.11■■□□□ 1.45
VPS29-206ENST00000549578 KIAA1217Q5T5P2 1943 aa24.11■■□□□ 1.45
VPS29-206ENST00000549578 MYCP01106 439 aaPredicted RBP24.1■■□□□ 1.45
VPS29-206ENST00000549578 PDIA4P13667 645 aaKnown RBP24.1■■□□□ 1.45
VPS29-206ENST00000549578 CCND3P30281 292 aaPredicted RBP24.1■■□□□ 1.45
VPS29-206ENST00000549578 CIITAP33076 1130 aa24.1■■□□□ 1.45
VPS29-206ENST00000549578 NRBP1Q9UHY1 535 aa24.1■■□□□ 1.45
VPS29-206ENST00000549578 ADCYAP1R1P41586 468 aa24.1■■□□□ 1.45
VPS29-206ENST00000549578 CCDC144BQ3MJ40 725 aa24.1■■□□□ 1.45
VPS29-206ENST00000549578 BRAPQ7Z569 592 aa24.1■■□□□ 1.45
VPS29-206ENST00000549578 JADE2Q9NQC1 790 aa24.1■■□□□ 1.45
VPS29-206ENST00000549578 ZDHHC9Q9Y397 364 aa24.1■■□□□ 1.45
VPS29-206ENST00000549578 IGLV3-22A0A075B6J6 115 aa24.09■■□□□ 1.45
VPS29-206ENST00000549578 CCNT1O60563 726 aaKnown RBP24.09■■□□□ 1.45
VPS29-206ENST00000549578 CNGA1P29973 690 aa24.09■■□□□ 1.45
VPS29-206ENST00000549578 TOB1P50616 345 aaPredicted RBP24.09■■□□□ 1.45
VPS29-206ENST00000549578 SEMA3FQ13275 785 aa24.09■■□□□ 1.45
VPS29-206ENST00000549578 NBR1Q14596 966 aa24.09■■□□□ 1.45
VPS29-206ENST00000549578 GNPTABQ3T906 1256 aa24.09■■□□□ 1.45
VPS29-206ENST00000549578 PRR16Q569H4 304 aa24.09■■□□□ 1.45
VPS29-206ENST00000549578 TMEM63BQ5T3F8 832 aa24.09■■□□□ 1.45
VPS29-206ENST00000549578 NLRX1Q86UT6 975 aa24.09■■□□□ 1.45
VPS29-206ENST00000549578 NOL7Q9UMY1 257 aaKnown RBP24.09■■□□□ 1.45
VPS29-206ENST00000549578 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.08■■□□□ 1.45
VPS29-206ENST00000549578 MEIS1O00470 390 aa24.08■■□□□ 1.45
VPS29-206ENST00000549578 ARIH2O95376 493 aa24.08■■□□□ 1.45
VPS29-206ENST00000549578 BRD1O95696 1058 aa24.08■■□□□ 1.45
VPS29-206ENST00000549578 MTMR1Q13613 665 aa24.08■■□□□ 1.45
VPS29-206ENST00000549578 FAM173BQ6P4H8 233 aa24.08■■□□□ 1.45
VPS29-206ENST00000549578 PLA2G4DQ86XP0 818 aa24.08■■□□□ 1.45
VPS29-206ENST00000549578 SCFD2Q8WU76 684 aa24.08■■□□□ 1.45
VPS29-206ENST00000549578 LENG9Q96B70 501 aa24.08■■□□□ 1.45
VPS29-206ENST00000549578 MRVI1Q9Y6F6 885 aa24.08■■□□□ 1.45
VPS29-206ENST00000549578 CYP3A7-CYP3A51PA0A087WV96 503 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 RBM47A0AV96 593 aaKnown RBP24.07■■□□□ 1.44
VPS29-206ENST00000549578 ADCY6O43306 1168 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 SLC37A4O43826 429 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 F13A1P00488 732 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 ARP10275 920 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 PTGS1P23219 599 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 CYP3A7P24462 503 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 MTFR1Q15390 333 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 MYSM1Q5VVJ2 828 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 MOXD1Q6UVY6 613 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 GPRASP2Q96D09 838 aa24.07■■□□□ 1.44
VPS29-206ENST00000549578 UIMC1Q96RL1 719 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms