RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 AFG1LQ8WV93 481 aa21.57■■□□□ 1.04
CHMP1A-207ENST00000549328 EMID1Q96A84 441 aaPredicted RBP21.57■■□□□ 1.04
CHMP1A-207ENST00000549328 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.57■■□□□ 1.041e-7■■□□□ 12.2
CHMP1A-207ENST00000549328 NOC4LQ9BVI4 516 aaKnown RBP21.57■■□□□ 1.04
CHMP1A-207ENST00000549328 SCN10AQ9Y5Y9 1956 aa21.57■■□□□ 1.04
CHMP1A-207ENST00000549328 PGM5Q15124 567 aa21.56■■□□□ 1.04
CHMP1A-207ENST00000549328 TMEM240Q5SV17 173 aa21.56■■□□□ 1.04
CHMP1A-207ENST00000549328 NEK1Q96PY6 1258 aa21.56■■□□□ 1.04
CHMP1A-207ENST00000549328 SLC12A7Q9Y666 1083 aa21.56■■□□□ 1.04
CHMP1A-207ENST00000549328 MRVI1Q9Y6F6 885 aa21.56■■□□□ 1.04
CHMP1A-207ENST00000549328 RGS20O76081 388 aa21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 MMP3P08254 477 aa21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 TGFB3P10600 412 aa21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 MYCLP12524 364 aaPredicted RBP21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 CASTP20810 708 aaKnown RBP21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 LAMC2Q13753 1193 aa21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 ZNF697Q5TEC3 545 aa21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 PSRC1Q6PGN9 363 aaPredicted RBP21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 FCHSD1Q86WN1 690 aa21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 SRBD1Q8N5C6 995 aaKnown RBP21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 IL23AQ9NPF7 189 aa21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 SEC63Q9UGP8 760 aaKnown RBP21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 STXBP5LQ9Y2K9 1186 aa21.55■■□□□ 1.04
CHMP1A-207ENST00000549328 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.54■■□□□ 1.04
CHMP1A-207ENST00000549328 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.54■■□□□ 1.04
CHMP1A-207ENST00000549328 CCND2P30279 289 aa21.54■■□□□ 1.04
CHMP1A-207ENST00000549328 KRT32Q14532 448 aa21.54■■□□□ 1.04
CHMP1A-207ENST00000549328 DGKDQ16760 1214 aa21.54■■□□□ 1.04
CHMP1A-207ENST00000549328 FANCBQ8NB91 859 aa21.54■■□□□ 1.04
CHMP1A-207ENST00000549328 PIBF1Q8WXW3 757 aa21.54■■□□□ 1.04
CHMP1A-207ENST00000549328 TRMT13Q9NUP7 481 aaKnown RBP21.54■■□□□ 1.04
CHMP1A-207ENST00000549328 STAM2O75886 525 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 PLEKHA8P1O95397 391 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 EXOSC10Q01780 885 aaKnown RBP21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 FAM47CQ5HY64 1035 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 RASIP1Q5U651 963 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 SYNE3Q6ZMZ3 975 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 ZNF365Q70YC5 407 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 DHX32Q7L7V1 743 aaKnown RBP21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 DHX37Q8IY37 1157 aaKnown RBP21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 IL31RAQ8NI17 732 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 PPTC7Q8NI37 304 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 LRRC2Q9BYS8 371 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 FRMPD4Q14CM0 1322 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 UMODL1Q5DID0 1318 aa21.53■■□□□ 1.04
CHMP1A-207ENST00000549328 PIK3CDO00329 1044 aa21.52■■□□□ 1.04
CHMP1A-207ENST00000549328 RASEFQ8IZ41 740 aa21.52■■□□□ 1.04
CHMP1A-207ENST00000549328 RPUSD2Q8IZ73 545 aaKnown RBP21.52■■□□□ 1.04
CHMP1A-207ENST00000549328 WNT8AQ9H1J5 351 aa21.52■■□□□ 1.04
CHMP1A-207ENST00000549328 TMEM265A0A087WTH1 108 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 PPFIA4O75335 1185 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 FGBP02675 491 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 HMGB1P09429 215 aaKnown RBP21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 ACRP10323 421 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 CYP2C9P11712 490 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 HOXD8P13378 290 aaPredicted RBP21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 RXRAP19793 462 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 CCL23P55773 120 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 CELF3Q5SZQ8 465 aaKnown RBP21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 MYSM1Q5VVJ2 828 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 SESTD1Q86VW0 696 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 HERVK_113Q902F9 699 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 KAT2BQ92831 832 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 CUL5Q93034 780 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 SEMA6BQ9H3T3 888 aa21.51■■□□□ 1.03
CHMP1A-207ENST00000549328 COL6A3P12111 3177 aa21.5■■□□□ 1.03
CHMP1A-207ENST00000549328 MEIS2O14770 477 aa21.5■■□□□ 1.03
CHMP1A-207ENST00000549328 GNPTABQ3T906 1256 aa21.5■■□□□ 1.03
CHMP1A-207ENST00000549328 XRRA1Q6P2D8 792 aa21.5■■□□□ 1.03
CHMP1A-207ENST00000549328 APOA5Q6Q788 366 aa21.5■■□□□ 1.03
CHMP1A-207ENST00000549328 TMTC3Q6ZXV5 915 aa21.5■■□□□ 1.03
CHMP1A-207ENST00000549328 CMTR1Q8N1G2 835 aaKnown RBP21.5■■□□□ 1.03
CHMP1A-207ENST00000549328 SMARCC2Q8TAQ2 1214 aa21.5■■□□□ 1.03
CHMP1A-207ENST00000549328 GUCD1Q96NT3 240 aa21.5■■□□□ 1.03
CHMP1A-207ENST00000549328 MTIF3Q9H2K0 278 aaKnown RBP21.5■■□□□ 1.03
CHMP1A-207ENST00000549328 PITPNM1O00562 1244 aa21.49■■□□□ 1.03
CHMP1A-207ENST00000549328 MRPS9P82933 396 aaKnown RBP21.49■■□□□ 1.03
CHMP1A-207ENST00000549328 ADCK5Q3MIX3 580 aa21.49■■□□□ 1.03
CHMP1A-207ENST00000549328 USP17L6PQ6QN14 398 aa21.49■■□□□ 1.03
CHMP1A-207ENST00000549328 MICU3Q86XE3 530 aa21.49■■□□□ 1.03
CHMP1A-207ENST00000549328 KCNB2Q92953 911 aa21.49■■□□□ 1.03
CHMP1A-207ENST00000549328 INPP4AQ96PE3 977 aaPredicted RBP21.49■■□□□ 1.03
CHMP1A-207ENST00000549328 KATNAL1Q9BW62 490 aa21.49■■□□□ 1.03
CHMP1A-207ENST00000549328 PSTPIP2Q9H939 334 aa21.49■■□□□ 1.03
CHMP1A-207ENST00000549328 RBM28Q9NW13 759 aaKnown RBP21.49■■□□□ 1.03
CHMP1A-207ENST00000549328 GGPS1O95749 300 aa21.48■■□□□ 1.03
CHMP1A-207ENST00000549328 PFKMP08237 780 aa21.48■■□□□ 1.03
CHMP1A-207ENST00000549328 UBA1P22314 1058 aaKnown RBP21.48■■□□□ 1.03
CHMP1A-207ENST00000549328 ICAM3P32942 547 aa21.48■■□□□ 1.03
CHMP1A-207ENST00000549328 SP2Q02086 613 aa21.48■■□□□ 1.03
CHMP1A-207ENST00000549328 FAM161BQ96MY7 647 aa21.48■■□□□ 1.03
CHMP1A-207ENST00000549328 SPATA33Q96N06 139 aa21.48■■□□□ 1.03
CHMP1A-207ENST00000549328 NOD1Q9Y239 953 aa21.48■■□□□ 1.03
CHMP1A-207ENST00000549328 MYH7BA7E2Y1 1941 aa21.48■■□□□ 1.03
CHMP1A-207ENST00000549328 HAS3O00219 553 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 F2P00734 622 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 RCAN1P53805 252 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 CHMP4BP1P59074 171 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 BFSP2Q13515 415 aa21.47■■□□□ 1.03
CHMP1A-207ENST00000549328 PTGISQ16647 500 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms