RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 RTN1Q16799 776 aa17.43■□□□□ 0.38
NR4A1-212ENST00000549102 LY6KQ17RY6 165 aa17.43■□□□□ 0.38
NR4A1-212ENST00000549102 BLOC1S2Q6QNY1 142 aa17.43■□□□□ 0.38
NR4A1-212ENST00000549102 VSIG10LQ86VR7 867 aa17.43■□□□□ 0.38
NR4A1-212ENST00000549102 IL31RAQ8NI17 732 aa17.43■□□□□ 0.38
NR4A1-212ENST00000549102 SEZ6LQ9BYH1 1024 aa17.43■□□□□ 0.38
NR4A1-212ENST00000549102 TBX21Q9UL17 535 aa17.43■□□□□ 0.38
NR4A1-212ENST00000549102 GRIN2DO15399 1336 aa17.43■□□□□ 0.38
NR4A1-212ENST00000549102 hCG_1642624A0A1W2PR95 340 aa17.42■□□□□ 0.38
NR4A1-212ENST00000549102 SOX1O00570 391 aaPredicted RBP17.42■□□□□ 0.38
NR4A1-212ENST00000549102 EPB41L2O43491 1005 aaKnown RBP17.42■□□□□ 0.38
NR4A1-212ENST00000549102 CCND2P30279 289 aa17.42■□□□□ 0.38
NR4A1-212ENST00000549102 SMARCC2Q8TAQ2 1214 aa17.42■□□□□ 0.38
NR4A1-212ENST00000549102 CUL5Q93034 780 aa17.42■□□□□ 0.38
NR4A1-212ENST00000549102 MTG1Q9BT17 334 aaPredicted RBP17.42■□□□□ 0.38
NR4A1-212ENST00000549102 DDX41Q9UJV9 622 aaKnown RBP17.42■□□□□ 0.38
NR4A1-212ENST00000549102 MRVI1Q9Y6F6 885 aa17.42■□□□□ 0.38
NR4A1-212ENST00000549102 FRMPD4Q14CM0 1322 aa17.42■□□□□ 0.38
NR4A1-212ENST00000549102 CNTNAP5Q8WYK1 1306 aa17.42■□□□□ 0.38
NR4A1-212ENST00000549102 GOLGA8AA7E2F4 631 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 GOLGA8BA8MQT2 603 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 PIK3CDO00329 1044 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 KPNA6O60684 536 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 RGS20O76081 388 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 CD4P01730 458 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 RCAN1P53805 252 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 ARHGAP1Q07960 439 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 LRIT3Q3SXY7 679 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 USP17L6PQ6QN14 398 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 Q6ZUG5 572 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 AFG1LQ8WV93 481 aa17.41■□□□□ 0.38
NR4A1-212ENST00000549102 NAP1L2Q9ULW6 460 aaPredicted RBP17.41■□□□□ 0.38
NR4A1-212ENST00000549102 SZT2Q5T011 3432 aa17.4■□□□□ 0.38
NR4A1-212ENST00000549102 MEIS2O14770 477 aa17.4■□□□□ 0.38
NR4A1-212ENST00000549102 TIMP1P01033 207 aa17.4■□□□□ 0.38
NR4A1-212ENST00000549102 CASTP20810 708 aaKnown RBP17.4■□□□□ 0.38
NR4A1-212ENST00000549102 RPS6KB1P23443 525 aa17.4■□□□□ 0.38
NR4A1-212ENST00000549102 PSMA5P28066 241 aa17.4■□□□□ 0.38
NR4A1-212ENST00000549102 KCNV1Q6PIU1 500 aa17.4■□□□□ 0.38
NR4A1-212ENST00000549102 HEATR3Q7Z4Q2 680 aa17.4■□□□□ 0.38
NR4A1-212ENST00000549102 GPKOWQ92917 476 aaPredicted RBP eCLIP17.4■□□□□ 0.38
NR4A1-212ENST00000549102 BRF1Q92994 677 aa17.4■□□□□ 0.38
NR4A1-212ENST00000549102 LRCH3Q96II8 777 aa17.4■□□□□ 0.38
NR4A1-212ENST00000549102 PSTPIP2Q9H939 334 aa17.4■□□□□ 0.38
NR4A1-212ENST00000549102 B4GALT4O60513 344 aa17.39■□□□□ 0.37
NR4A1-212ENST00000549102 MMP3P08254 477 aa17.39■□□□□ 0.37
NR4A1-212ENST00000549102 FPGSQ05932 587 aa17.39■□□□□ 0.37
NR4A1-212ENST00000549102 APOBRQ0VD83 1088 aa17.39■□□□□ 0.37
NR4A1-212ENST00000549102 FUT2Q10981 343 aa17.39■□□□□ 0.37
NR4A1-212ENST00000549102 EMID1Q96A84 441 aaPredicted RBP17.39■□□□□ 0.37
NR4A1-212ENST00000549102 ZFP91Q96JP5 570 aaPredicted RBP17.39■□□□□ 0.37
NR4A1-212ENST00000549102 USP26Q9BXU7 913 aa17.39■□□□□ 0.37
NR4A1-212ENST00000549102 TRPV6Q9H1D0 765 aa17.39■□□□□ 0.37
NR4A1-212ENST00000549102 FAM217BQ9NTX9 383 aaPredicted RBP17.39■□□□□ 0.37
NR4A1-212ENST00000549102 STAM2O75886 525 aa17.38■□□□□ 0.37
NR4A1-212ENST00000549102 CDC27P30260 824 aa17.38■□□□□ 0.37
NR4A1-212ENST00000549102 METAP2P50579 478 aaKnown RBP eCLIP17.38■□□□□ 0.37
NR4A1-212ENST00000549102 MRPS9P82933 396 aaKnown RBP17.38■□□□□ 0.37
NR4A1-212ENST00000549102 LAMC2Q13753 1193 aa17.38■□□□□ 0.37
NR4A1-212ENST00000549102 SHHQ15465 462 aa17.38■□□□□ 0.37
NR4A1-212ENST00000549102 NBPF20Q3BBV1 942 aa17.38■□□□□ 0.37
NR4A1-212ENST00000549102 C9orf50Q5SZB4 431 aa17.38■□□□□ 0.37
NR4A1-212ENST00000549102 MFSD5Q6N075 450 aa17.38■□□□□ 0.37
NR4A1-212ENST00000549102 DHX37Q8IY37 1157 aaKnown RBP17.38■□□□□ 0.37
NR4A1-212ENST00000549102 FBXL16Q8N461 479 aa17.38■□□□□ 0.37
NR4A1-212ENST00000549102 PPP1R12CQ9BZL4 782 aa17.38■□□□□ 0.37
NR4A1-212ENST00000549102 ALDH8A1Q9H2A2 487 aaPredicted RBP17.38■□□□□ 0.37
NR4A1-212ENST00000549102 CCDC196A0A1B0GTZ2 297 aa17.37■□□□□ 0.37
NR4A1-212ENST00000549102 TGFB3P10600 412 aa17.37■□□□□ 0.37
NR4A1-212ENST00000549102 UBA1P22314 1058 aaKnown RBP17.37■□□□□ 0.37
NR4A1-212ENST00000549102 EPHB4P54760 987 aa17.37■□□□□ 0.37
NR4A1-212ENST00000549102 DGKDQ16760 1214 aa17.37■□□□□ 0.37
NR4A1-212ENST00000549102 GNPTABQ3T906 1256 aa17.37■□□□□ 0.37
NR4A1-212ENST00000549102 FAM47CQ5HY64 1035 aa17.37■□□□□ 0.37
NR4A1-212ENST00000549102 WWC2Q6AWC2 1192 aa17.37■□□□□ 0.37
NR4A1-212ENST00000549102 NFRKBQ6P4R8 1299 aa17.37■□□□□ 0.37
NR4A1-212ENST00000549102 PPTC7Q8NI37 304 aa17.37■□□□□ 0.37
NR4A1-212ENST00000549102 AGXT2Q9BYV1 514 aa17.37■□□□□ 0.37
NR4A1-212ENST00000549102 V9GY48 417 aaPredicted RBP17.37■□□□□ 0.37
NR4A1-212ENST00000549102 DOCK5Q9H7D0 1870 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 SORBS3O60504 671 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 GGPS1O95749 300 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 CYP2C18P33260 490 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 ADD1P35611 737 aaKnown RBP17.36■□□□□ 0.37
NR4A1-212ENST00000549102 NAPAP54920 295 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 SP2Q02086 613 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 UBE2SQ16763 222 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 CELF3Q5SZQ8 465 aaKnown RBP17.36■□□□□ 0.37
NR4A1-212ENST00000549102 MYSM1Q5VVJ2 828 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 PCNX4Q63HM2 1172 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 PPP1R18Q6NYC8 613 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 XRRA1Q6P2D8 792 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 RUFY3Q7L099 469 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 TMEM199Q8N511 208 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 INPP4AQ96PE3 977 aaPredicted RBP17.36■□□□□ 0.37
NR4A1-212ENST00000549102 HIPK3Q9H422 1215 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 TRMT13Q9NUP7 481 aaKnown RBP17.36■□□□□ 0.37
NR4A1-212ENST00000549102 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 NID2Q14112 1375 aa17.36■□□□□ 0.37
NR4A1-212ENST00000549102 SPDYE3A6NKU9 549 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms