RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 GTPBP4Q9BZE4 634 aaKnown RBP1.91□□□□□ -2.1
LGR5-205ENST00000549015 CRNKL1Q9BZJ0 848 aaKnown RBP1.91□□□□□ -2.1
LGR5-205ENST00000549015 BRINP2Q9C0B6 783 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 PUS7LQ9H0K6 701 aaKnown RBP1.91□□□□□ -2.1
LGR5-205ENST00000549015 RBSNQ9H1K0 784 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 FOXP1Q9H334 677 aaPredicted RBP1.91□□□□□ -2.1
LGR5-205ENST00000549015 GPAMQ9HCL2 828 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 BRMS1Q9HCU9 246 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 BRD7Q9NPI1 651 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 TIMMDC1Q9NPL8 285 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 PIH1D3Q9NQM4 214 aaKnown RBP1.91□□□□□ -2.1
LGR5-205ENST00000549015 HCSTQ9UBK5 93 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 DACH1Q9UI36 760 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 G3BP2Q9UN86 482 aaKnown RBP1.91□□□□□ -2.1
LGR5-205ENST00000549015 LEMD3Q9Y2U8 911 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 PPME1Q9Y570 386 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 SLC12A7Q9Y666 1083 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP1.91□□□□□ -2.1
LGR5-205ENST00000549015 C4AP0C0L4 1744 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 IRS2Q9Y4H2 1338 aa1.91□□□□□ -2.1
LGR5-205ENST00000549015 A0A1B0GUL6 1792 aa1.9□□□□□ -2.1
LGR5-205ENST00000549015 COL1A1P02452 1464 aaPredicted RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 COL2A1P02458 1487 aaPredicted RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 BTAF1O14981 1849 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 NUP98P52948 1817 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 ESYT3A0FGR9 886 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 KLRG2A4D1S0 409 aaPredicted RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 GOLGA6L9A6NEM1 432 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 SMTNL1A8MU46 457 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 GSG1L2A8MUP6 293 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 BECN2A8MW95 431 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 POTECB2RU33 542 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 SPATA31C2B4DYI2 1134 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 GOLGA6L19H0YKK7 550 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 LAD1O00515 517 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 IFIT3O14879 490 aaKnown RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 SPTLC2O15270 562 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 CCP110O43303 1012 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 CBFA2T2O43439 604 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 SLC26A4O43511 780 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 GREM1O60565 184 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 JAK2O60674 1132 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 MMP20O60882 483 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 CUTAO60888 179 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 OFD1O75665 1012 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 BBOX1O75936 387 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 ADAMTS2O95450 1211 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 BAG3O95817 575 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 BPNT1O95861 308 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 MMP1P03956 469 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 APPP05067 770 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 PTMAP06454 111 aaKnown RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 PSAPP07602 524 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 LDHCP07864 332 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 HCLS1P14317 486 aaPredicted RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 FDPSP14324 419 aaKnown RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 CPA1P15085 419 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 TIMP2P16035 220 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 RHOQP17081 205 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 TFE3P19532 575 aaPredicted RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 TARSP26639 723 aaKnown RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 CALML3P27482 149 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 MSX1P28360 303 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 SMARCA1P28370 1054 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 CNGA1P29973 690 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 HOXA10P31260 410 aaPredicted RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 HIBADHP31937 336 aaKnown RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 KIF5BP33176 963 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 PPP1R2P41236 205 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 CRKP46108 304 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 ME1P48163 572 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 ZNF165P49910 485 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 RPS8P62241 208 aaKnown RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 ST5P78524 1137 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 AKAP17AQ02040 695 aaKnown RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 LMNB2Q03252 620 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 TYRO3Q06418 890 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 PDE4BQ07343 736 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 PPARAQ07869 468 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 SSRP1Q08945 709 aaKnown RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 CHAF1AQ13111 956 aaPredicted RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 SNW1Q13573 536 aaKnown RBP1.9□□□□□ -2.11
LGR5-205ENST00000549015 GRAPQ13588 217 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 CCINQ13939 588 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 SEPT6Q14141 434 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 RASA3Q14644 834 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 WTAPQ15007 396 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 SLC39A14Q15043 492 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 NTRK3Q16288 839 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 FXNQ16595 210 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 DDR2Q16832 855 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 CTC1Q2NKJ3 1217 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 MTERF2Q49AM1 385 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 CRY2Q49AN0 593 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 ANO6Q4KMQ2 910 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 PLEKHG4Q58EX7 1191 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 ARSHQ5FYA8 562 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 TMEM67Q5HYA8 995 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 WDR44Q5JSH3 913 aa1.9□□□□□ -2.11
LGR5-205ENST00000549015 C6orf118Q5T5N4 469 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms