RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 PMLP29590 882 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 NFIXQ14938 502 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 B3GNT8Q7Z7M8 397 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 DCP2Q8IU60 420 aaKnown RBP7.1□□□□□ -1.27
UBE2N-202ENST00000548946 FEZF2Q8TBJ5 459 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 CPA5Q8WXQ8 436 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 RTEL1Q9NZ71 1219 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 MARCH2Q9P0N8 246 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 NCOA2Q15596 1464 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 FYCO1Q9BQS8 1478 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 HFM1A2PYH4 1435 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 FGD6Q6ZV73 1430 aa7.1□□□□□ -1.27
UBE2N-202ENST00000548946 NTRK1P04629 796 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 HOXC12P31275 282 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 ETFBP38117 255 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 KCNC1P48547 511 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 IRX6P78412 446 aaPredicted RBP7.09□□□□□ -1.27
UBE2N-202ENST00000548946 ARID5AQ03989 594 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 E4F1Q66K89 784 aaPredicted RBP7.09□□□□□ -1.27
UBE2N-202ENST00000548946 ZDHHC14Q8IZN3 488 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 TP53I13Q8NBR0 393 aaPredicted RBP7.09□□□□□ -1.27
UBE2N-202ENST00000548946 BTN2A2Q8WVV5 523 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 KRTAP4-2Q9BYR5 136 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 AP5M1Q9H0R1 490 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 BCAS3Q9H6U6 928 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 CCDC18Q5T9S5 1454 aa7.09□□□□□ -1.27
UBE2N-202ENST00000548946 WASHC2AQ641Q2 1341 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 SUSD5O60279 629 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 FOXD2O60548 495 aaPredicted RBP7.08□□□□□ -1.28
UBE2N-202ENST00000548946 HSPA5P11021 654 aaKnown RBP7.08□□□□□ -1.28
UBE2N-202ENST00000548946 MC3RP41968 323 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 GTF2A2P52657 109 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 MBLAC2Q68D91 279 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 PLEKHO2Q8TD55 490 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 FRS2Q8WU20 508 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 CCDC140Q96MF4 163 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 LGR4Q9BXB1 951 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 BTG4Q9NY30 223 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 R3HCC1Q9Y3T6 440 aaKnown RBP7.08□□□□□ -1.28
UBE2N-202ENST00000548946 PTPN23Q9H3S7 1636 aa7.08□□□□□ -1.28
UBE2N-202ENST00000548946 EFCAB5A4FU69 1503 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 B2RBV5 119 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 C22orf46C9J442 243 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 MYO1BO43795 1136 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 CPP00450 1065 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 PLA2G1BP04054 148 aaKnown RBP7.07□□□□□ -1.28
UBE2N-202ENST00000548946 ITGAVP06756 1048 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 SNRPB2P08579 225 aaKnown RBP7.07□□□□□ -1.28
UBE2N-202ENST00000548946 SYN1P17600 705 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 DEKP35659 375 aaKnown RBP7.07□□□□□ -1.28
UBE2N-202ENST00000548946 RPL11P62913 178 aaKnown RBP7.07□□□□□ -1.28
UBE2N-202ENST00000548946 HTRA3P83110 453 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 CACNB2Q08289 660 aaPredicted RBP7.07□□□□□ -1.28
UBE2N-202ENST00000548946 INF2Q27J81 1249 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 VWA3BQ502W6 1294 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 CCDC184Q52MB2 194 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 SAPCD2Q86UD0 394 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 ZNF227Q86WZ6 799 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 SYT8Q8NBV8 401 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 NPLOC4Q8TAT6 608 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 DPF3Q92784 378 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 DIO2Q92813 273 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 TIMM13Q9Y5L4 95 aaPredicted RBP7.07□□□□□ -1.28
UBE2N-202ENST00000548946 NAIPQ13075 1403 aa7.07□□□□□ -1.28
UBE2N-202ENST00000548946 FGRP09769 529 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 ECI1P42126 302 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 SLURP1P55000 103 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 KCNAB2Q13303 367 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 LIPIQ6XZB0 460 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 EEPD1Q7L9B9 569 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 TEX2Q8IWB9 1127 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 SMARCC2Q8TAQ2 1214 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 CXorf38Q8TB03 319 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 EPN3Q9H201 632 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 ZNF408Q9H9D4 720 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 PCDH18Q9HCL0 1135 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 SIT1Q9Y3P8 196 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 FHOD3Q2V2M9 1422 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 CNTLNQ9NXG0 1405 aa7.06□□□□□ -1.28
UBE2N-202ENST00000548946 SH3D21A4FU49 640 aa7.05□□□□□ -1.28
UBE2N-202ENST00000548946 AGRPO00253 132 aa7.05□□□□□ -1.28
UBE2N-202ENST00000548946 MEFVO15553 781 aaPredicted RBP7.05□□□□□ -1.28
UBE2N-202ENST00000548946 SCG5P05408 212 aa7.05□□□□□ -1.28
UBE2N-202ENST00000548946 KCNJ6P48051 423 aa7.05□□□□□ -1.28
UBE2N-202ENST00000548946 MROH9Q5TGP6 573 aa7.05□□□□□ -1.28
UBE2N-202ENST00000548946 CEP68Q76N32 757 aa7.05□□□□□ -1.28
UBE2N-202ENST00000548946 FRMD5Q7Z6J6 570 aa7.05□□□□□ -1.28
UBE2N-202ENST00000548946 SEC14L1Q92503 715 aa7.05□□□□□ -1.28
UBE2N-202ENST00000548946 TEPSINQ96N21 525 aa7.05□□□□□ -1.28
UBE2N-202ENST00000548946 TINF2Q9BSI4 451 aa7.05□□□□□ -1.28
UBE2N-202ENST00000548946 DENND4BO75064 1496 aaPredicted RBP7.04□□□□□ -1.28
UBE2N-202ENST00000548946 PRDM2Q13029 1718 aa7.04□□□□□ -1.28
UBE2N-202ENST00000548946 RNF123Q5XPI4 1314 aa7.04□□□□□ -1.28
UBE2N-202ENST00000548946 ZBED9Q6R2W3 1325 aa7.04□□□□□ -1.28
UBE2N-202ENST00000548946 NCOA1Q15788 1441 aa7.04□□□□□ -1.28
UBE2N-202ENST00000548946 TBX1O43435 398 aa7.04□□□□□ -1.28
UBE2N-202ENST00000548946 DNAJA1P31689 397 aaKnown RBP7.04□□□□□ -1.28
UBE2N-202ENST00000548946 CYP4F3Q08477 520 aa7.04□□□□□ -1.28
UBE2N-202ENST00000548946 ACBD5Q5T8D3 534 aaPredicted RBP7.04□□□□□ -1.28
UBE2N-202ENST00000548946 ETV3LQ6ZN32 361 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms