RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 RAD50Q92878 1312 aa10.02□□□□□ -0.81
TROAP-208ENST00000548817 GREB1LQ9C091 1923 aaPredicted RBP10.01□□□□□ -0.81
TROAP-208ENST00000548817 SOWAHBA6NEL2 793 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 TSPY2A6NKD2 308 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 STXBP3O00186 592 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 ALAS1P13196 640 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 SELPP16109 830 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 AVPR2P30518 371 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 LTBRP36941 435 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 HTRA4P83105 476 aaPredicted RBP10.01□□□□□ -0.81
TROAP-208ENST00000548817 PPARAQ07869 468 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 IKBKEQ14164 716 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 EPC2Q52LR7 807 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 C20orf194Q5TEA3 1177 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 TSHZ3Q63HK5 1081 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 EP400NLQ6ZTU2 488 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 LRRC8DQ7L1W4 858 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 TMCO2Q7Z6W1 182 aaPredicted RBP10.01□□□□□ -0.81
TROAP-208ENST00000548817 RPAINQ86UA6 219 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 MORC4Q8TE76 937 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 CHMP4CQ96CF2 233 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 TRERF1Q96PN7 1200 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 EPB41L4AQ9HCS5 686 aaPredicted RBP10.01□□□□□ -0.81
TROAP-208ENST00000548817 A1CFQ9NQ94 594 aaKnown RBP10.01□□□□□ -0.81
TROAP-208ENST00000548817 RNF146Q9NTX7 359 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 STX8Q9UNK0 236 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 ACACBO00763 2458 aa10.01□□□□□ -0.81
TROAP-208ENST00000548817 RALGAPA2Q2PPJ7 1873 aa10□□□□□ -0.81
TROAP-208ENST00000548817 MYL3P08590 195 aa10□□□□□ -0.81
TROAP-208ENST00000548817 MCCP23508 829 aa10□□□□□ -0.81
TROAP-208ENST00000548817 GPM6BQ13491 265 aa10□□□□□ -0.81
TROAP-208ENST00000548817 RCSD1Q6JBY9 416 aa10□□□□□ -0.81
TROAP-208ENST00000548817 KIAA1211Q6ZU35 1233 aa10□□□□□ -0.81
TROAP-208ENST00000548817 SESTD1Q86VW0 696 aa10□□□□□ -0.81
TROAP-208ENST00000548817 GMCL1Q96IK5 515 aa10□□□□□ -0.81
TROAP-208ENST00000548817 LMAN2LQ9H0V9 348 aa10□□□□□ -0.81
TROAP-208ENST00000548817 PDGFCQ9NRA1 345 aa10□□□□□ -0.81
TROAP-208ENST00000548817 TRIP12Q14669 1992 aaPredicted RBP10□□□□□ -0.81
TROAP-208ENST00000548817 CHD8Q9HCK8 2581 aa10□□□□□ -0.81
TROAP-208ENST00000548817 VPS13AQ96RL7 3174 aa10□□□□□ -0.81
TROAP-208ENST00000548817 CHD6Q8TD26 2715 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 MICAL3Q7RTP6 2002 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 RBM47A0AV96 593 aaKnown RBP9.99□□□□□ -0.81
TROAP-208ENST00000548817 A6NJR5 290 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 NKRFO15226 690 aaKnown RBP eCLIP9.99□□□□□ -0.81
TROAP-208ENST00000548817 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
TROAP-208ENST00000548817 RANBP6O60518 1105 aaKnown RBP9.99□□□□□ -0.81
TROAP-208ENST00000548817 PLA2G6O60733 806 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 VCPP55072 806 aaKnown RBP9.99□□□□□ -0.81
TROAP-208ENST00000548817 CBX2Q14781 532 aaPredicted RBP9.99□□□□□ -0.81
TROAP-208ENST00000548817 GPNMBQ14956 572 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 PTGISQ16647 500 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 CCDC96Q2M329 555 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 MCTP2Q6DN12 878 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 FBXO16Q8IX29 292 aaPredicted RBP9.99□□□□□ -0.81
TROAP-208ENST00000548817 TOMM22Q9NS69 142 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 ADD3Q9UEY8 706 aaKnown RBP9.99□□□□□ -0.81
TROAP-208ENST00000548817 MTMR7Q9Y216 660 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 PLIN4Q96Q06 1357 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 BAHCC1Q9P281 2608 aa9.99□□□□□ -0.81
TROAP-208ENST00000548817 NLRC5Q86WI3 1866 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 LOC730098B7Z3J9 87 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 H0Y858 1186 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 EYA4O95677 639 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 AMHP03971 560 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 PTGS1P23219 599 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 ZMYM1Q5SVZ6 1142 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 NSMFQ6X4W1 530 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 KCTD1Q719H9 257 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 FBXO11Q86XK2 927 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 NKD2Q969F2 451 aaPredicted RBP9.98□□□□□ -0.81
TROAP-208ENST00000548817 SEC62Q99442 399 aaKnown RBP9.98□□□□□ -0.81
TROAP-208ENST00000548817 MPHOSPH6Q99547 160 aaKnown RBP9.98□□□□□ -0.81
TROAP-208ENST00000548817 WDR11Q9BZH6 1224 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 TLR9Q9NR96 1032 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 CD207Q9UJ71 328 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 CCPG1Q9ULG6 757 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 MYO7AQ13402 2215 aa9.98□□□□□ -0.81
TROAP-208ENST00000548817 B4DLN1 442 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 NBNO60934 754 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 RB1P06400 928 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 MX1P20591 662 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 MRPL12P52815 198 aaKnown RBP9.97□□□□□ -0.81
TROAP-208ENST00000548817 SNAP25P60880 206 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 CTDSPL2Q05D32 466 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 MKRN4PQ13434 485 aaPredicted RBP9.97□□□□□ -0.81
TROAP-208ENST00000548817 TMEM63BQ5T3F8 832 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 FAM117BQ6P1L5 589 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 EEPD1Q7L9B9 569 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 TMEM192Q8IY95 271 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 OR6J1Q8NGC5 347 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 DCAF4Q8WV16 495 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 ASIC4Q96FT7 647 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 CYP39A1Q9NYL5 469 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 PNMA2Q9UL42 364 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 PRR12Q9ULL5 1215 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 EMSYQ7Z589 1322 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 DMXL1Q9Y485 3027 aa9.97□□□□□ -0.81
TROAP-208ENST00000548817 EP300Q09472 2414 aaPredicted RBP9.96□□□□□ -0.81
TROAP-208ENST00000548817 DMDP11532 3685 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms