RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 MRVI1Q9Y6F6 885 aa13.17□□□□□ -0.3
BEST3-209ENST00000548658 B4GALT4O60513 344 aa13.16□□□□□ -0.3
BEST3-209ENST00000548658 STAM2O75886 525 aa13.16□□□□□ -0.3
BEST3-209ENST00000548658 NEFLP07196 543 aa13.16□□□□□ -0.3
BEST3-209ENST00000548658 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
BEST3-209ENST00000548658 PTGS1P23219 599 aa13.16□□□□□ -0.3
BEST3-209ENST00000548658 HOXA13P31271 388 aaPredicted RBP13.16□□□□□ -0.3
BEST3-209ENST00000548658 TSGA10IPQ3SY00 556 aa13.16□□□□□ -0.3
BEST3-209ENST00000548658 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
BEST3-209ENST00000548658 PSRC1Q6PGN9 363 aaPredicted RBP13.16□□□□□ -0.3
BEST3-209ENST00000548658 VSIG10LQ86VR7 867 aa13.16□□□□□ -0.3
BEST3-209ENST00000548658 SGMS1Q86VZ5 419 aa13.16□□□□□ -0.3
BEST3-209ENST00000548658 CUL5Q93034 780 aa13.16□□□□□ -0.3
BEST3-209ENST00000548658 EMID1Q96A84 441 aaPredicted RBP13.16□□□□□ -0.3
BEST3-209ENST00000548658 PPP1R12CQ9BZL4 782 aa13.16□□□□□ -0.3
BEST3-209ENST00000548658 MTIF3Q9H2K0 278 aaKnown RBP13.16□□□□□ -0.3
BEST3-209ENST00000548658 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.15□□□□□ -0.3
BEST3-209ENST00000548658 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.15□□□□□ -0.3
BEST3-209ENST00000548658 ARIH2O95376 493 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 MYCLP12524 364 aaPredicted RBP13.15□□□□□ -0.3
BEST3-209ENST00000548658 CSF2RAP15509 400 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 CCND2P30279 289 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 EPHB4P54760 987 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 PGM5Q15124 567 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 DGKDQ16760 1214 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 LY6KQ17RY6 165 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 SLC35G1Q2M3R5 365 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 DHX32Q7L7V1 743 aaKnown RBP13.15□□□□□ -0.3
BEST3-209ENST00000548658 FCHSD1Q86WN1 690 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 DHX37Q8IY37 1157 aaKnown RBP13.15□□□□□ -0.3
BEST3-209ENST00000548658 RPUSD2Q8IZ73 545 aaKnown RBP13.15□□□□□ -0.3
BEST3-209ENST00000548658 FANCBQ8NB91 859 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 AFG1LQ8WV93 481 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 COPS5Q92905 334 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 TRPV6Q9H1D0 765 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 MTMR10Q9NXD2 777 aa13.15□□□□□ -0.3
BEST3-209ENST00000548658 BAZ2BQ9UIF8 2168 aaKnown RBP13.15□□□□□ -0.3
BEST3-209ENST00000548658 TMEM265A0A087WTH1 108 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 PIK3CDO00329 1044 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 PPFIA4O75335 1185 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 CYP2C18P33260 490 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 ARHGAP1Q07960 439 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 FAM47CQ5HY64 1035 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 Q7L0L9 218 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 PPTC7Q8NI37 304 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 SMARCC2Q8TAQ2 1214 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
BEST3-209ENST00000548658 MYL10Q9BUA6 226 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 NOC4LQ9BVI4 516 aaKnown RBP13.14□□□□□ -0.31
BEST3-209ENST00000548658 KATNAL1Q9BW62 490 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 IL23AQ9NPF7 189 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 STXBP5LQ9Y2K9 1186 aa13.14□□□□□ -0.31
BEST3-209ENST00000548658 FGBP02675 491 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 PFKMP08237 780 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 MMP3P08254 477 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 BFSP2Q13515 415 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 XRRA1Q6P2D8 792 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 SESTD1Q86VW0 696 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
BEST3-209ENST00000548658 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
BEST3-209ENST00000548658 RBM28Q9NW13 759 aaKnown RBP13.13□□□□□ -0.31
BEST3-209ENST00000548658 NOD1Q9Y239 953 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 KIAA1217Q5T5P2 1943 aa13.13□□□□□ -0.31
BEST3-209ENST00000548658 REC8O95072 547 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 RCAN1P53805 252 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 FGD1P98174 961 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 EXOSC10Q01780 885 aaKnown RBP13.12□□□□□ -0.31
BEST3-209ENST00000548658 CELF3Q5SZQ8 465 aaKnown RBP13.12□□□□□ -0.31
BEST3-209ENST00000548658 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 ZNF365Q70YC5 407 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 C16orf59Q7L2K0 433 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 MICU3Q86XE3 530 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 CCDC155Q8N6L0 562 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 RETREG2Q8NC44 543 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 PSTPIP2Q9H939 334 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 MLXIPQ9HAP2 919 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 SCN10AQ9Y5Y9 1956 aa13.12□□□□□ -0.31
BEST3-209ENST00000548658 ZBTB43O43298 467 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 EPB41L2O43491 1005 aaKnown RBP13.11□□□□□ -0.31
BEST3-209ENST00000548658 RGS20O76081 388 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 PLEKHA8P1O95397 391 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 RXRAP19793 462 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 ICAM3P32942 547 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 RFC2P35250 354 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 CCL23P55773 120 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 NEDD9Q14511 834 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 RASIP1Q5U651 963 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 TMTC3Q6ZXV5 915 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 C7orf31Q8N865 590 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 HERVK_113Q902F9 699 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 SPATA33Q96N06 139 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 LRRC2Q9BYS8 371 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms