RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 RCSD1Q6JBY9 416 aa25.53■■□□□ 1.68
NPAS3-206ENST00000548645 TMED8Q6PL24 325 aaPredicted RBP25.53■■□□□ 1.68
NPAS3-206ENST00000548645 NHSL1Q5SYE7 1610 aa25.53■■□□□ 1.68
NPAS3-206ENST00000548645 ZSCAN5CA6NGD5 496 aaPredicted RBP25.53■■□□□ 1.68
NPAS3-206ENST00000548645 FAM107AO95990 144 aa25.53■■□□□ 1.68
NPAS3-206ENST00000548645 ARFGAP2Q8N6H7 521 aa25.53■■□□□ 1.68
NPAS3-206ENST00000548645 VCPKMTQ9H867 229 aa25.53■■□□□ 1.68
NPAS3-206ENST00000548645 SLC39A2Q9NP94 309 aa25.53■■□□□ 1.68
NPAS3-206ENST00000548645 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.53■■□□□ 1.68
NPAS3-206ENST00000548645 GNAQP50148 359 aa25.53■■□□□ 1.68
NPAS3-206ENST00000548645 TACO1Q9BSH4 297 aaKnown RBP25.53■■□□□ 1.68
NPAS3-206ENST00000548645 EVX2Q03828 476 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 ACTN3Q08043 901 aaPredicted RBP25.52■■□□□ 1.68
NPAS3-206ENST00000548645 TDRD12Q587J7 1177 aaKnown RBP25.52■■□□□ 1.68
NPAS3-206ENST00000548645 PPP4R3AQ6IN85 833 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 CASKIN2Q8WXE0 1202 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 POLD4Q9HCU8 107 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 SLIT2O94813 1529 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 GOLGA6L10A6NI86 522 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 RBAK-RBAKDNI3L0D1 243 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 CHUKO15111 745 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 SMTNP53814 917 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 ITGB3BPQ13352 177 aaPredicted RBP25.52■■□□□ 1.68
NPAS3-206ENST00000548645 DRP2Q13474 957 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 ARHGAP27Q6ZUM4 889 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.52■■□□□ 1.682e-6■■■■■ 52.6
NPAS3-206ENST00000548645 KRT12Q99456 494 aa25.52■■□□□ 1.68
NPAS3-206ENST00000548645 JPH2Q9BR39 696 aaPredicted RBP25.52■■□□□ 1.68
NPAS3-206ENST00000548645 CRNKL1Q9BZJ0 848 aaKnown RBP25.52■■□□□ 1.68
NPAS3-206ENST00000548645 CCDC172P0C7W6 258 aa25.51■■□□□ 1.67
NPAS3-206ENST00000548645 SEC24CP53992 1094 aa25.51■■□□□ 1.67
NPAS3-206ENST00000548645 CDC37Q16543 378 aaPredicted RBP25.51■■□□□ 1.67
NPAS3-206ENST00000548645 MAATS1Q7Z4T9 603 aa25.51■■□□□ 1.67
NPAS3-206ENST00000548645 HPS3Q969F9 1004 aa25.51■■□□□ 1.67
NPAS3-206ENST00000548645 DCP1AQ9NPI6 582 aaPredicted RBP25.51■■□□□ 1.67
NPAS3-206ENST00000548645 HDLBPQ00341 1268 aaKnown RBP25.51■■□□□ 1.67
NPAS3-206ENST00000548645 HEATR3Q7Z4Q2 680 aa25.51■■□□□ 1.67
NPAS3-206ENST00000548645 GPIHBP1Q8IV16 184 aa25.51■■□□□ 1.67
NPAS3-206ENST00000548645 RDXP35241 583 aaKnown RBP25.5■■□□□ 1.67
NPAS3-206ENST00000548645 SLC9C1Q4G0N8 1177 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 STAG2Q8N3U4 1231 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 NUCKS1Q9H1E3 243 aaKnown RBP25.5■■□□□ 1.67
NPAS3-206ENST00000548645 E7EVH7 732 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 PALMO75781 387 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 HSPA9P38646 679 aaKnown RBP25.5■■□□□ 1.67
NPAS3-206ENST00000548645 EVA1CP58658 441 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 IFT88Q13099 833 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 CEP85LQ5SZL2 805 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 HGSNATQ68CP4 663 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 PNMA1Q8ND90 353 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 ZNF384Q8TF68 577 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 CALML4Q96GE6 196 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 ATP8A2Q9NTI2 1148 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 ARPP21Q9UBL0 812 aaPredicted RBP25.5■■□□□ 1.67
NPAS3-206ENST00000548645 PLAAQ9Y263 795 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 TNNC1P63316 161 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 CCDC40Q4G0X9 1142 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 CAVIN4Q5BKX8 364 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 KLC4Q9NSK0 619 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 BARHL2Q9NY43 387 aa25.5■■□□□ 1.67
NPAS3-206ENST00000548645 COL1A1P02452 1464 aaPredicted RBP25.49■■□□□ 1.67
NPAS3-206ENST00000548645 LRRC63Q05C16 580 aa25.49■■□□□ 1.67
NPAS3-206ENST00000548645 SV2BQ7L1I2 683 aa25.49■■□□□ 1.67
NPAS3-206ENST00000548645 DGKHQ86XP1 1220 aa25.49■■□□□ 1.67
NPAS3-206ENST00000548645 MYH1P12882 1939 aa25.49■■□□□ 1.67
NPAS3-206ENST00000548645 LRIG3Q6UXM1 1119 aa25.49■■□□□ 1.67
NPAS3-206ENST00000548645 GUF1Q8N442 669 aaKnown RBP25.49■■□□□ 1.67
NPAS3-206ENST00000548645 TMBIM4Q9HC24 238 aa25.49■■□□□ 1.67
NPAS3-206ENST00000548645 A0A1B0GUL6 1792 aa25.48■■□□□ 1.67
NPAS3-206ENST00000548645 GRM4Q14833 912 aa25.48■■□□□ 1.67
NPAS3-206ENST00000548645 NAB2Q15742 525 aa25.48■■□□□ 1.67
NPAS3-206ENST00000548645 CCDC13Q8IYE1 715 aa25.48■■□□□ 1.67
NPAS3-206ENST00000548645 PVALEFA0A1B0GWK0 134 aa25.48■■□□□ 1.67
NPAS3-206ENST00000548645 STXBP3O00186 592 aa25.48■■□□□ 1.67
NPAS3-206ENST00000548645 DNA2P51530 1060 aa25.48■■□□□ 1.67
NPAS3-206ENST00000548645 SBK1Q52WX2 424 aa25.48■■□□□ 1.67
NPAS3-206ENST00000548645 C6orf89Q6UWU4 347 aa25.48■■□□□ 1.67
NPAS3-206ENST00000548645 EIF1ADQ8N9N8 165 aaKnown RBP25.48■■□□□ 1.67
NPAS3-206ENST00000548645 PLCB1Q9NQ66 1216 aa25.48■■□□□ 1.67
NPAS3-206ENST00000548645 CCNT1O60563 726 aaKnown RBP25.47■■□□□ 1.67
NPAS3-206ENST00000548645 FTCDO95954 541 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 SERPING1P05155 500 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 UNC13DQ70J99 1090 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 BRINP3Q76B58 766 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 C3orf20Q8ND61 904 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 SYN2Q92777 582 aaPredicted RBP25.47■■□□□ 1.67
NPAS3-206ENST00000548645 CYP2D6P10635 497 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 ATP2B2Q01814 1243 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 UBE4AQ14139 1066 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 LETM2Q2VYF4 491 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 PARP10Q53GL7 1025 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 MEI1Q5TIA1 1274 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 SFMBT2Q5VUG0 894 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 KRT25Q7Z3Z0 450 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 TMC4Q7Z404 712 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 INPP4AQ96PE3 977 aaPredicted RBP25.47■■□□□ 1.67
NPAS3-206ENST00000548645 TANGO6Q9C0B7 1094 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 TAF1DQ9H5J8 278 aaPredicted RBP25.47■■□□□ 1.67
NPAS3-206ENST00000548645 ACTR5Q9H9F9 607 aaPredicted RBP25.47■■□□□ 1.67
NPAS3-206ENST00000548645 GCOM1H8Y6P7 765 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms