RNA–Protein interactions for RNA: ENST00000548311.5

TROAP-207, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-207ENST00000548311 ARHGAP1Q07960 439 aa17.71■□□□□ 0.43
TROAP-207ENST00000548311 SCLYQ96I15 445 aa17.71■□□□□ 0.43
TROAP-207ENST00000548311 PDCD2LQ9BRP1 358 aa17.71■□□□□ 0.43
TROAP-207ENST00000548311 MAP3K20Q9NYL2 800 aaKnown RBP17.71■□□□□ 0.43
TROAP-207ENST00000548311 NOD1Q9Y239 953 aa17.71■□□□□ 0.43
TROAP-207ENST00000548311 SORBS3O60504 671 aa17.7■□□□□ 0.42
TROAP-207ENST00000548311 RXRAP19793 462 aa17.7■□□□□ 0.42
TROAP-207ENST00000548311 GHRHRQ02643 423 aa17.7■□□□□ 0.42
TROAP-207ENST00000548311 NFRKBQ6P4R8 1299 aa17.7■□□□□ 0.42
TROAP-207ENST00000548311 RAB11FIP4Q86YS3 637 aa17.7■□□□□ 0.42
TROAP-207ENST00000548311 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
TROAP-207ENST00000548311 RRP36Q96EU6 259 aaKnown RBP17.7■□□□□ 0.42
TROAP-207ENST00000548311 ZFP91Q96JP5 570 aaPredicted RBP17.7■□□□□ 0.42
TROAP-207ENST00000548311 TMEM87BQ96K49 555 aa17.7■□□□□ 0.42
TROAP-207ENST00000548311 LRRC2Q9BYS8 371 aa17.7■□□□□ 0.42
TROAP-207ENST00000548311 WNT8AQ9H1J5 351 aa17.7■□□□□ 0.42
TROAP-207ENST00000548311 TTYH1Q9H313 450 aaPredicted RBP17.7■□□□□ 0.42
TROAP-207ENST00000548311 SEC63Q9UGP8 760 aaKnown RBP17.7■□□□□ 0.42
TROAP-207ENST00000548311 DDX41Q9UJV9 622 aaKnown RBP17.7■□□□□ 0.42
TROAP-207ENST00000548311 CDH23Q9H251 3354 aa17.7■□□□□ 0.42
TROAP-207ENST00000548311 FGBP02675 491 aa17.69■□□□□ 0.42
TROAP-207ENST00000548311 CASTP20810 708 aaKnown RBP17.69■□□□□ 0.42
TROAP-207ENST00000548311 DNAJB2P25686 324 aa17.69■□□□□ 0.42
TROAP-207ENST00000548311 CCND2P30279 289 aa17.69■□□□□ 0.42
TROAP-207ENST00000548311 COL9A3Q14050 684 aaPredicted RBP17.69■□□□□ 0.42
TROAP-207ENST00000548311 PGM5Q15124 567 aa17.69■□□□□ 0.42
TROAP-207ENST00000548311 NECTIN1Q15223 517 aa17.69■□□□□ 0.42
TROAP-207ENST00000548311 OTOP2Q7RTS6 562 aa17.69■□□□□ 0.42
TROAP-207ENST00000548311 DHX37Q8IY37 1157 aaKnown RBP17.69■□□□□ 0.42
TROAP-207ENST00000548311 TMTC2Q8N394 836 aa17.69■□□□□ 0.42
TROAP-207ENST00000548311 SAMD3Q8N6K7 520 aa17.69■□□□□ 0.42
TROAP-207ENST00000548311 MAP3K14Q99558 947 aa17.69■□□□□ 0.42
TROAP-207ENST00000548311 CDX2Q99626 313 aaPredicted RBP17.69■□□□□ 0.42
TROAP-207ENST00000548311 MTA3Q9BTC8 594 aa17.69■□□□□ 0.42
TROAP-207ENST00000548311 MTIF3Q9H2K0 278 aaKnown RBP17.69■□□□□ 0.42
TROAP-207ENST00000548311 GRXCR1A8MXD5 290 aa17.68■□□□□ 0.42
TROAP-207ENST00000548311 PLEKHA8P1O95397 391 aa17.68■□□□□ 0.42
TROAP-207ENST00000548311 GNAQP50148 359 aa17.68■□□□□ 0.42
TROAP-207ENST00000548311 DGKDQ16760 1214 aa17.68■□□□□ 0.42
TROAP-207ENST00000548311 RNF20Q5VTR2 975 aa17.68■□□□□ 0.42
TROAP-207ENST00000548311 RPUSD2Q8IZ73 545 aaKnown RBP17.68■□□□□ 0.42
TROAP-207ENST00000548311 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
TROAP-207ENST00000548311 LZTS2Q9BRK4 669 aa17.68■□□□□ 0.42
TROAP-207ENST00000548311 SPZ1Q9BXG8 430 aa17.68■□□□□ 0.42
TROAP-207ENST00000548311 SLC12A7Q9Y666 1083 aa17.68■□□□□ 0.42
TROAP-207ENST00000548311 ZBBXA8MT70 800 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 CDC45O75419 566 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 ZNF286BP0CG31 522 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 PTPN11Q06124 597 aaPredicted RBP17.67■□□□□ 0.42
TROAP-207ENST00000548311 LAMC2Q13753 1193 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 DEFB128Q7Z7B8 93 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 VSIG10LQ86VR7 867 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 MYLIPQ8WY64 445 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 HERVK_113Q902F9 699 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 CUL5Q93034 780 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 TIFAQ96CG3 184 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 CXXC1Q9P0U4 656 aaPredicted RBP17.67■□□□□ 0.42
TROAP-207ENST00000548311 A0A0C4DFX4 3053 aa17.67■□□□□ 0.42
TROAP-207ENST00000548311 MYH7BA7E2Y1 1941 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 TMEM265A0A087WTH1 108 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 RGS20O76081 388 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 GGPS1O95749 300 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 CALM1P0DP23 149 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 CALM2P0DP24 149 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 CALM3P0DP25 149 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 PBX2P40425 430 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 LIFRP42702 1097 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 PTGISQ16647 500 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 RASIP1Q5U651 963 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 KCNV1Q6PIU1 500 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 MICU3Q86XE3 530 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 CCDC82Q8N4S0 544 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 SRBD1Q8N5C6 995 aaKnown RBP17.66■□□□□ 0.42
TROAP-207ENST00000548311 RETREG2Q8NC44 543 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 PPTC7Q8NI37 304 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 KAT2BQ92831 832 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 EMID1Q96A84 441 aaPredicted RBP17.66■□□□□ 0.42
TROAP-207ENST00000548311 CCDC136Q96JN2 1154 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 SPATA33Q96N06 139 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 ALG1Q9BT22 464 aa17.66■□□□□ 0.42
TROAP-207ENST00000548311 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
TROAP-207ENST00000548311 FOSL2P15408 326 aa17.65■□□□□ 0.42
TROAP-207ENST00000548311 UBA1P22314 1058 aaKnown RBP17.65■□□□□ 0.42
TROAP-207ENST00000548311 PSEN2P49810 448 aa17.65■□□□□ 0.42
TROAP-207ENST00000548311 CELF3Q5SZQ8 465 aaKnown RBP17.65■□□□□ 0.42
TROAP-207ENST00000548311 SYNE3Q6ZMZ3 975 aa17.65■□□□□ 0.42
TROAP-207ENST00000548311 C7orf31Q8N865 590 aa17.65■□□□□ 0.42
TROAP-207ENST00000548311 GPKOWQ92917 476 aaPredicted RBP eCLIP17.65■□□□□ 0.42
TROAP-207ENST00000548311 KATNAL1Q9BW62 490 aa17.65■□□□□ 0.42
TROAP-207ENST00000548311 PBX4Q9BYU1 374 aa17.65■□□□□ 0.42
TROAP-207ENST00000548311 SMARCA1P28370 1054 aa17.64■□□□□ 0.41
TROAP-207ENST00000548311 BFSP2Q13515 415 aa17.64■□□□□ 0.41
TROAP-207ENST00000548311 MFSD10Q14728 455 aa17.64■□□□□ 0.41
TROAP-207ENST00000548311 GNPTABQ3T906 1256 aa17.64■□□□□ 0.41
TROAP-207ENST00000548311 MYSM1Q5VVJ2 828 aa17.64■□□□□ 0.41
TROAP-207ENST00000548311 GDF6Q6KF10 455 aaPredicted RBP17.64■□□□□ 0.41
TROAP-207ENST00000548311 USP17L6PQ6QN14 398 aa17.64■□□□□ 0.41
TROAP-207ENST00000548311 TCEANC2Q96MN5 208 aa17.64■□□□□ 0.41
TROAP-207ENST00000548311 NEK1Q96PY6 1258 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms