RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PFKM-208	ENST00000547148	NOL7	Q9UMY1	257 aa	Known RBP	13.57	□□□□□ -0.24
PFKM-208	ENST00000547148	GABRQ	Q9UN88	632 aa		13.57	□□□□□ -0.24
PFKM-208	ENST00000547148	IGLV3-22	A0A075B6J6	115 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	FAM86B1	E9PN63	330 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	GNRH1	P01148	92 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	FAM86B2	P0C5J1	330 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	CYP2B6	P20813	491 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	CCND2	P30279	289 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	DNM1	Q05193	864 aa	Known RBP	13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	PPP4R3A	Q6IN85	833 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	XRRA1	Q6P2D8	792 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	MOXD1	Q6UVY6	613 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	MAMDC4	Q6UXC1	1216 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	LENG9	Q96B70	501 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	USP28	Q96RU2	1077 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	SLC5A4	Q9NY91	659 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	SRRD	Q9UH36	339 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	PCDHB6	Q9Y5E3	794 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	ATP6V1D	Q9Y5K8	247 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	MGAM	O43451	1857 aa		13.56	□□□□□ -0.24
PFKM-208	ENST00000547148	ASB14	A6NK59	587 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	SLC37A4	O43826	429 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	CCNT1	O60563	726 aa	Known RBP	13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	MYCL	P12524	364 aa	Predicted RBP	13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	XRCC5	P13010	732 aa	Known RBP	13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	ITGB5	P18084	799 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	ATP2B1	P20020	1258 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	FLT3LG	P49771	235 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	FXR1	P51114	621 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	ORC2	Q13416	577 aa	Predicted RBP	13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	CEP55	Q53EZ4	464 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	ARMCX2	Q7L311	632 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	MSL3	Q8N5Y2	521 aa	Known RBP	13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	CYP2W1	Q8TAV3	490 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	ZFP91	Q96JP5	570 aa	Predicted RBP	13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	POLR3E	Q9NVU0	708 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	FLRT1	Q9NZU1	646 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	UBIAD1	Q9Y5Z9	338 aa		13.55	□□□□□ -0.24
PFKM-208	ENST00000547148	STAM2	O75886	525 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	RGS20	O76081	388 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	GCFC2	P16383	781 aa	Known RBP	13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	NASP	P49321	788 aa	Predicted RBP	13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	PDE4D	Q08499	809 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	ZNF174	Q15697	407 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	CCL14	Q16627	93 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148		Q4G0T1	1027 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	ANO1	Q5XXA6	986 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	OLFML2B	Q68BL8	750 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	ATL3	Q6DD88	541 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	POTED	Q86YR6	584 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	INPP4A	Q96PE3	977 aa	Predicted RBP	13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	MPHOSPH6	Q99547	160 aa	Known RBP	13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	NAP1L4	Q99733	375 aa	Known RBP	13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	MXRA8	Q9BRK3	442 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	TINF2	Q9BSI4	451 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	KATNBL1	Q9H079	304 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	DDX25	Q9UHL0	483 aa	Known RBP	13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	CLIC4	Q9Y696	253 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148	SYNGAP1	Q96PV0	1343 aa		13.54	□□□□□ -0.24
PFKM-208	ENST00000547148		B4DLN1	442 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	MEIS1	O00470	390 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	DLL1	O00548	723 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	NEMF	O60524	1076 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	EIF3J	O75822	258 aa	Known RBP	13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	SNAI1	O95863	264 aa	Predicted RBP	13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	HOXD10	P28358	340 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	MCM7	P33993	719 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	ZNF76	P36508	570 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	SET	Q01105	290 aa	Predicted RBP	13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	IRF5	Q13568	498 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	PTPA	Q15257	358 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	SF3A1	Q15459	793 aa	Known RBP	13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	STXBP2	Q15833	593 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	PRR16	Q569H4	304 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	OTOP1	Q7RTM1	612 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	NIPA1	Q7RTP0	329 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	C4orf32	Q8N8J7	132 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	TRIB2	Q92519	343 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	ZNF396	Q96N95	335 aa	Predicted RBP	13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	KCNMB3	Q9NPA1	279 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	JADE2	Q9NQC1	790 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	RTEL1	Q9NZ71	1219 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	PLXNA1	Q9UIW2	1896 aa		13.53	□□□□□ -0.24
PFKM-208	ENST00000547148	MYH7B	A7E2Y1	1941 aa		13.52	□□□□□ -0.24
PFKM-208	ENST00000547148	MYH15	Q9Y2K3	1946 aa		13.52	□□□□□ -0.24
PFKM-208	ENST00000547148	KRT85	P78386	507 aa		13.52	□□□□□ -0.25
PFKM-208	ENST00000547148	CEBPZ	Q03701	1054 aa	Known RBP	13.52	□□□□□ -0.25
PFKM-208	ENST00000547148	SEMA3F	Q13275	785 aa		13.52	□□□□□ -0.25
PFKM-208	ENST00000547148	ARHGEF6	Q15052	776 aa		13.52	□□□□□ -0.25
PFKM-208	ENST00000547148	CLEC17A	Q6ZS10	378 aa		13.52	□□□□□ -0.25
PFKM-208	ENST00000547148	FBXO16	Q8IX29	292 aa	Predicted RBP	13.52	□□□□□ -0.25
PFKM-208	ENST00000547148	ETNPPL	Q8TBG4	499 aa		13.52	□□□□□ -0.25
PFKM-208	ENST00000547148	GPRASP2	Q96D09	838 aa		13.52	□□□□□ -0.25
PFKM-208	ENST00000547148	MTMR9	Q96QG7	549 aa		13.52	□□□□□ -0.25
PFKM-208	ENST00000547148	WDR11	Q9BZH6	1224 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms