RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 SEC63Q9UGP8 760 aaKnown RBP17.7■□□□□ 0.42
SSH1-204ENST00000546697 DCDC2CA8MYV0 355 aa17.69■□□□□ 0.42
SSH1-204ENST00000546697 EIF2AK2P19525 551 aaKnown RBP17.69■□□□□ 0.42
SSH1-204ENST00000546697 RXRAP19793 462 aa17.69■□□□□ 0.42
SSH1-204ENST00000546697 PSMA5P28066 241 aa17.69■□□□□ 0.42
SSH1-204ENST00000546697 HOXA13P31271 388 aaPredicted RBP17.69■□□□□ 0.42
SSH1-204ENST00000546697 ICAM3P32942 547 aa17.69■□□□□ 0.42
SSH1-204ENST00000546697 ARHGAP1Q07960 439 aa17.69■□□□□ 0.42
SSH1-204ENST00000546697 BLOC1S2Q6QNY1 142 aa17.69■□□□□ 0.42
SSH1-204ENST00000546697 CXCL17Q6UXB2 119 aa17.69■□□□□ 0.42
SSH1-204ENST00000546697 NOL8Q76FK4 1167 aaKnown RBP17.69■□□□□ 0.42
SSH1-204ENST00000546697 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
SSH1-204ENST00000546697 ITGB8P26012 769 aa17.68■□□□□ 0.42
SSH1-204ENST00000546697 ITGA7Q13683 1181 aa17.68■□□□□ 0.42
SSH1-204ENST00000546697 RTN1Q16799 776 aa17.68■□□□□ 0.42
SSH1-204ENST00000546697 BRDTQ58F21 947 aaPredicted RBP17.68■□□□□ 0.42
SSH1-204ENST00000546697 PPP1R18Q6NYC8 613 aa17.68■□□□□ 0.42
SSH1-204ENST00000546697 OR6J1Q8NGC5 347 aa17.68■□□□□ 0.42
SSH1-204ENST00000546697 IL31RAQ8NI17 732 aa17.68■□□□□ 0.42
SSH1-204ENST00000546697 TCEANC2Q96MN5 208 aa17.68■□□□□ 0.42
SSH1-204ENST00000546697 JAKMIP1Q96N16 626 aaKnown RBP17.68■□□□□ 0.42
SSH1-204ENST00000546697 KLF18A0A0U1RQI7 1052 aa17.67■□□□□ 0.42
SSH1-204ENST00000546697 PQBP1O60828 265 aaKnown RBP17.67■□□□□ 0.42
SSH1-204ENST00000546697 GH1P01241 217 aa17.67■□□□□ 0.42
SSH1-204ENST00000546697 MRPS9P82933 396 aaKnown RBP17.67■□□□□ 0.42
SSH1-204ENST00000546697 PTPN11Q06124 597 aaPredicted RBP17.67■□□□□ 0.42
SSH1-204ENST00000546697 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
SSH1-204ENST00000546697 COPS5Q92905 334 aa17.67■□□□□ 0.42
SSH1-204ENST00000546697 LBHD1Q9BQE6 289 aaPredicted RBP17.67■□□□□ 0.42
SSH1-204ENST00000546697 MTG1Q9BT17 334 aaPredicted RBP17.67■□□□□ 0.42
SSH1-204ENST00000546697 UBE2OQ9C0C9 1292 aaKnown RBP17.67■□□□□ 0.42
SSH1-204ENST00000546697 CCDC196A0A1B0GTZ2 297 aa17.66■□□□□ 0.42
SSH1-204ENST00000546697 TIMP1P01033 207 aa17.66■□□□□ 0.42
SSH1-204ENST00000546697 CDC27P30260 824 aa17.66■□□□□ 0.42
SSH1-204ENST00000546697 CCND2P30279 289 aa17.66■□□□□ 0.42
SSH1-204ENST00000546697 PCNX4Q63HM2 1172 aa17.66■□□□□ 0.42
SSH1-204ENST00000546697 NFRKBQ6P4R8 1299 aa17.66■□□□□ 0.42
SSH1-204ENST00000546697 Q6ZUG5 572 aa17.66■□□□□ 0.42
SSH1-204ENST00000546697 RUFY3Q7L099 469 aa17.66■□□□□ 0.42
SSH1-204ENST00000546697 SESTD1Q86VW0 696 aa17.66■□□□□ 0.42
SSH1-204ENST00000546697 PPTC7Q8NI37 304 aa17.66■□□□□ 0.42
SSH1-204ENST00000546697 MMP3P08254 477 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 CPA1P15085 419 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 ANAPC15P60006 121 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 MDM2Q00987 491 aaPredicted RBP17.65■□□□□ 0.42
SSH1-204ENST00000546697 LAMC2Q13753 1193 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 NTRK3Q16288 839 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 LY6KQ17RY6 165 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 MYSM1Q5VVJ2 828 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 TYW1BQ6NUM6 668 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 USP17L6PQ6QN14 398 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 SEPT14Q6ZU15 432 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 BADQ92934 168 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 BRF1Q92994 677 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 SENP7Q9BQF6 1050 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 ALDH8A1Q9H2A2 487 aaPredicted RBP17.65■□□□□ 0.42
SSH1-204ENST00000546697 PSTPIP2Q9H939 334 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 TMEM39AQ9NV64 488 aa17.65■□□□□ 0.42
SSH1-204ENST00000546697 GOLGA8AA7E2F4 631 aa17.64■□□□□ 0.41
SSH1-204ENST00000546697 GOLGA8BA8MQT2 603 aa17.64■□□□□ 0.41
SSH1-204ENST00000546697 SPATA31C2B4DYI2 1134 aa17.64■□□□□ 0.41
SSH1-204ENST00000546697 TLR3O15455 904 aaKnown RBP17.64■□□□□ 0.41
SSH1-204ENST00000546697 CASTP20810 708 aaKnown RBP17.64■□□□□ 0.41
SSH1-204ENST00000546697 WWC2Q6AWC2 1192 aa17.64■□□□□ 0.41
SSH1-204ENST00000546697 MFSD5Q6N075 450 aa17.64■□□□□ 0.41
SSH1-204ENST00000546697 AFG1LQ8WV93 481 aa17.64■□□□□ 0.41
SSH1-204ENST00000546697 CUL5Q93034 780 aa17.64■□□□□ 0.41
SSH1-204ENST00000546697 GLT8D2Q9H1C3 349 aa17.64■□□□□ 0.41
SSH1-204ENST00000546697 BARHL2Q9NY43 387 aa17.64■□□□□ 0.41
SSH1-204ENST00000546697 MRVI1Q9Y6F6 885 aa17.64■□□□□ 0.41
SSH1-204ENST00000546697 ESYT2A0FGR8 921 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 HAS3O00219 553 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
SSH1-204ENST00000546697 PPFIA4O75335 1185 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 F2P00734 622 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 ADD1P35611 737 aaKnown RBP17.63■□□□□ 0.41
SSH1-204ENST00000546697 CLK2P49760 499 aaKnown RBP17.63■□□□□ 0.41
SSH1-204ENST00000546697 METAP2P50579 478 aaKnown RBP eCLIP17.63■□□□□ 0.41
SSH1-204ENST00000546697 SP2Q02086 613 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 APOBRQ0VD83 1088 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 SEMA3FQ13275 785 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 TOB2Q14106 344 aaPredicted RBP17.63■□□□□ 0.41
SSH1-204ENST00000546697 GNPTABQ3T906 1256 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 CELF3Q5SZQ8 465 aaKnown RBP17.63■□□□□ 0.41
SSH1-204ENST00000546697 FCHSD1Q86WN1 690 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 RAB11FIP4Q86YS3 637 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 KAT2BQ92831 832 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 RIC8AQ9NPQ8 531 aa17.63■□□□□ 0.41
SSH1-204ENST00000546697 PRDM5Q9NQX1 630 aaPredicted RBP17.63■□□□□ 0.41
SSH1-204ENST00000546697 STXBP3O00186 592 aa17.62■□□□□ 0.41
SSH1-204ENST00000546697 SOX1O00570 391 aaPredicted RBP17.62■□□□□ 0.41
SSH1-204ENST00000546697 FIBPO43427 364 aa17.62■□□□□ 0.41
SSH1-204ENST00000546697 B4GALT4O60513 344 aa17.62■□□□□ 0.41
SSH1-204ENST00000546697 RAG1P15918 1043 aa17.62■□□□□ 0.41
SSH1-204ENST00000546697 IFNAR1P17181 557 aa17.62■□□□□ 0.41
SSH1-204ENST00000546697 UBA1P22314 1058 aaKnown RBP17.62■□□□□ 0.41
SSH1-204ENST00000546697 PDIA3P30101 505 aaKnown RBP17.62■□□□□ 0.41
SSH1-204ENST00000546697 DGKDQ16760 1214 aa17.62■□□□□ 0.41
SSH1-204ENST00000546697 PFKFB3Q16875 520 aaPredicted RBP17.62■□□□□ 0.41
SSH1-204ENST00000546697 CCDC82Q8N4S0 544 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms