RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 FKBP3Q00688 224 aaKnown RBP13.85□□□□□ -0.19
PAAF1-215ENST00000544909 DDR1Q08345 913 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 KIF5AQ12840 1032 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 SMC1AQ14683 1233 aaKnown RBP13.85□□□□□ -0.19
PAAF1-215ENST00000544909 LRRC55Q6ZSA7 311 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 PODNQ7Z5L7 613 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 KIAA1328Q86T90 577 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 SLFN12Q8IYM2 578 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 ADGRF4Q8IZF3 695 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 NLGN1Q8N2Q7 840 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 TMX4Q9H1E5 349 aaPredicted RBP13.85□□□□□ -0.19
PAAF1-215ENST00000544909 SEMA6BQ9H3T3 888 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 NYAP2Q9P242 653 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 DDX25Q9UHL0 483 aaKnown RBP13.85□□□□□ -0.19
PAAF1-215ENST00000544909 L1RE1Q9UN81 338 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
PAAF1-215ENST00000544909 PES1O00541 588 aaKnown RBP13.85□□□□□ -0.19
PAAF1-215ENST00000544909 SLC37A4O43826 429 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 CYP2C19P33261 490 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 TRAF1Q13077 416 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 ZCWPW2Q504Y3 356 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 SEPT12Q8IYM1 358 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 JAKMIP2Q96AA8 810 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 CCDC42Q96M95 316 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 ZDHHC15Q96MV8 337 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 GPR101Q96P66 508 aaPredicted RBP13.85□□□□□ -0.19
PAAF1-215ENST00000544909 LUC7LQ9NQ29 371 aaKnown RBP13.85□□□□□ -0.19
PAAF1-215ENST00000544909 JRKLQ9Y4A0 524 aa13.85□□□□□ -0.19
PAAF1-215ENST00000544909 RASSF10A6NK89 507 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 SASH3O75995 380 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 FCER1AP12319 257 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
PAAF1-215ENST00000544909 HAUS3Q68CZ6 603 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 DPP8Q6V1X1 898 aaPredicted RBP13.84□□□□□ -0.19
PAAF1-215ENST00000544909 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
PAAF1-215ENST00000544909 MYOCDQ8IZQ8 938 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 FLAD1Q8NFF5 587 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 DDX12PQ92771 950 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 PKNOX2Q96KN3 472 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 IDI2Q9BXS1 227 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 PSTPIP2Q9H939 334 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 KANSL2Q9H9L4 492 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 KCNMB3Q9NPA1 279 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 MED4Q9NPJ6 270 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 FAM184BQ9ULE4 1060 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 GUCA1BQ9UMX6 200 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 ANKRD31Q8N7Z5 1873 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 ATP8B3O60423 1300 aa13.84□□□□□ -0.19
PAAF1-215ENST00000544909 FRMD3A2A2Y4 597 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 PJA2O43164 708 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 EDIL3O43854 480 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 TDP2O95551 362 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 FOSP01100 380 aaPredicted RBP13.83□□□□□ -0.2
PAAF1-215ENST00000544909 PDE6BP35913 854 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 EDRF1Q3B7T1 1238 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 CCDC65Q8IXS2 484 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 EXOC4Q96A65 974 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 VAT1LQ9HCJ6 419 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 AGPAT5Q9NUQ2 364 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 USP40Q9NVE5 1235 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 PCDHA12Q9UN75 941 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 MTMR7Q9Y216 660 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 RBAK-RBAKDNI3L0D1 243 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 TACC1O75410 805 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 TNNI2P48788 182 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 MCM6Q14566 821 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 FAM26FQ5R3K3 315 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 CCDC70Q6NSX1 233 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 APOBEC3HQ6NTF7 200 aaKnown RBP13.83□□□□□ -0.2
PAAF1-215ENST00000544909 LRRC47Q8N1G4 583 aaKnown RBP13.83□□□□□ -0.2
PAAF1-215ENST00000544909 RNF10Q8N5U6 811 aaKnown RBP13.83□□□□□ -0.2
PAAF1-215ENST00000544909 HAS1Q92839 578 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 SECISBP2LQ93073 1101 aaKnown RBP13.83□□□□□ -0.2
PAAF1-215ENST00000544909 DNAJC19Q96DA6 116 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 ALS2CR12Q96Q35 445 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 PLIN2Q99541 437 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 DDX4Q9NQI0 724 aaKnown RBP13.83□□□□□ -0.2
PAAF1-215ENST00000544909 TMEM260Q9NX78 707 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 RNF14Q9UBS8 474 aa13.83□□□□□ -0.2
PAAF1-215ENST00000544909 PUF60Q9UHX1 559 aaKnown RBP13.83□□□□□ -0.2
PAAF1-215ENST00000544909 FRMPD2Q68DX3 1309 aaPredicted RBP13.82□□□□□ -0.2
PAAF1-215ENST00000544909 MYH4Q9Y623 1939 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 A0A0U1RQJ8 604 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 COBLO75128 1261 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 SEC31AO94979 1220 aaKnown RBP13.82□□□□□ -0.2
PAAF1-215ENST00000544909 CLSTN1O94985 981 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 ANXA13P27216 316 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 USP14P54578 494 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 CDC42EP5Q6NZY7 148 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 CERS5Q8N5B7 392 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 GMCL1P1Q8NEA9 526 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 ATRIPQ8WXE1 791 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 CRYGNQ8WXF5 182 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 COA7Q96BR5 231 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 MXD3Q9BW11 206 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 SLC39A2Q9NP94 309 aa13.82□□□□□ -0.2
PAAF1-215ENST00000544909 CEP72Q9P209 647 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms