RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 GLIS2Q9BZE0 524 aaPredicted RBP8.91□□□□□ -0.98
TRIM59-208ENST00000543469 CCSER1Q9C0I3 900 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 ZSWIM4Q9H7M6 989 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 CTDNEP1O95476 244 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 SLFN14P0C7P3 912 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 SREBF1P36956 1147 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 CEP55Q53EZ4 464 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 HACE1Q8IYU2 909 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 MSL3Q8N5Y2 521 aaKnown RBP8.91□□□□□ -0.98
TRIM59-208ENST00000543469 PDILTQ8N807 584 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 RETREG2Q8NC44 543 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 TCP11Q8WWU5 503 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 DRC1Q96MC2 740 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 GDPD2Q9HCC8 539 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 CYP3A4P08684 503 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 GNAT1P11488 350 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 RGS2P41220 211 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF165P49910 485 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 MTMR1Q13613 665 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 Q4G0T1 1027 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 NBPF11Q86T75 865 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 ACER1Q8TDN7 264 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 GRPEL1Q9HAV7 217 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 SLC38A10Q9HBR0 1119 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 LARSQ9P2J5 1176 aaKnown RBP8.91□□□□□ -0.98
TRIM59-208ENST00000543469 SEL1LQ9UBV2 794 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 UBE2Q2LH0YL09 131 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 M0QZ92 97 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 KPNA6O60684 536 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 PPFIA3O75145 1194 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 COL11A2P13942 1736 aaPredicted RBP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 FXR2P51116 673 aaKnown RBP eCLIP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 RSPH3Q86UC2 560 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 ZKSCAN4Q969J2 545 aaPredicted RBP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 DLEC1Q9Y238 1755 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 TMEM88BA6NKF7 163 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 FOXP2O15409 715 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 POLR2DO15514 142 aaKnown RBP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 KIF4AO95239 1232 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 FDPSP14324 419 aaKnown RBP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 MATR3P43243 847 aaKnown RBP eCLIP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 NOVP48745 357 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 PLEKHH3Q7Z736 793 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 ZFPM1Q8IX07 1006 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 NUP88Q99567 741 aaPredicted RBP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 CLIC4Q9Y696 253 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 AKAP11Q9UKA4 1901 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 CASZ1Q86V15 1759 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 CNTNAP1P78357 1384 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 TUBGCP6Q96RT7 1819 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 TULP1O00294 542 aaPredicted RBP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 VWA5AO00534 786 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 ATP2A1O14983 1001 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 USP2O75604 605 aaPredicted RBP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 POTEJP0CG39 1038 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 TYRO3Q06418 890 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 STRN3Q13033 797 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 GRM1Q13255 1194 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 TTBK2Q6IQ55 1244 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 ZBTB8OSQ8IWT0 167 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 TRIM47Q96LD4 638 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 MAP7D2Q96T17 732 aa8.9□□□□□ -0.98
TRIM59-208ENST00000543469 TTC12Q9H892 705 aaPredicted RBP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 CGNQ9P2M7 1197 aaKnown RBP8.9□□□□□ -0.98
TRIM59-208ENST00000543469 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.9□□□□□ -0.988e-11■□□□□ 10.3
TRIM59-208ENST00000543469 EIF3JO75822 258 aaKnown RBP8.9□□□□□ -0.99
TRIM59-208ENST00000543469 PRMT2P55345 433 aa8.9□□□□□ -0.99
TRIM59-208ENST00000543469 HERVK_113P62684 666 aa8.9□□□□□ -0.99
TRIM59-208ENST00000543469 NR5A1Q13285 461 aa8.9□□□□□ -0.99
TRIM59-208ENST00000543469 CAMK4Q16566 473 aa8.9□□□□□ -0.99
TRIM59-208ENST00000543469 PCNX4Q63HM2 1172 aa8.9□□□□□ -0.99
TRIM59-208ENST00000543469 MCPH1Q8NEM0 835 aa8.9□□□□□ -0.99
TRIM59-208ENST00000543469 LARP4BQ92615 738 aaKnown RBP8.9□□□□□ -0.99
TRIM59-208ENST00000543469 ATG4CQ96DT6 458 aa8.9□□□□□ -0.99
TRIM59-208ENST00000543469 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.9□□□□□ -0.99
TRIM59-208ENST00000543469 TAF6LQ9Y6J9 622 aa8.9□□□□□ -0.99
TRIM59-208ENST00000543469 A0A1B0GVL5 298 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 P4HBP07237 508 aaKnown RBP8.89□□□□□ -0.99
TRIM59-208ENST00000543469 TGFB3P10600 412 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 XRCC6P12956 609 aaKnown RBP eCLIP8.89□□□□□ -0.99
TRIM59-208ENST00000543469 YBX3P16989 372 aaKnown RBP eCLIP8.89□□□□□ -0.99
TRIM59-208ENST00000543469 SYCP1Q15431 976 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 CCDC40Q4G0X9 1142 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 VTI1AQ96AJ9 217 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 NUDT12Q9BQG2 462 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 MXRA8Q9BRK3 442 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 PGAP2Q9UHJ9 254 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 PVALEFA0A1B0GWK0 134 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 GAS2O43903 313 aaKnown RBP8.89□□□□□ -0.99
TRIM59-208ENST00000543469 DDIT3P35638 169 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 TECP42680 631 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 AFMP43652 599 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 TRIM14Q14142 442 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 UBE2SQ16763 222 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 PPP4R3CPQ6ZMV5 832 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 SH3BP5LQ7L8J4 393 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 SYMPKQ92797 1274 aaKnown RBP8.89□□□□□ -0.99
TRIM59-208ENST00000543469 KATNAL1Q9BW62 490 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 KCNH4Q9UQ05 1017 aa8.89□□□□□ -0.99
TRIM59-208ENST00000543469 AFG3L2Q9Y4W6 797 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms