RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 IGDCC4Q8TDY8 1250 aa14.01□□□□□ -0.17
PTPN6-220ENST00000543115 ZFP91Q96JP5 570 aaPredicted RBP14.01□□□□□ -0.17
PTPN6-220ENST00000543115 CTAGE1Q96RT6 745 aa14.01□□□□□ -0.17
PTPN6-220ENST00000543115 PDCD2LQ9BRP1 358 aa14.01□□□□□ -0.17
PTPN6-220ENST00000543115 COL25A1Q9BXS0 654 aaPredicted RBP14.01□□□□□ -0.17
PTPN6-220ENST00000543115 RBM8AQ9Y5S9 174 aaKnown RBP14.01□□□□□ -0.17
PTPN6-220ENST00000543115 SCN10AQ9Y5Y9 1956 aa14.01□□□□□ -0.17
PTPN6-220ENST00000543115 CUL9Q8IWT3 2517 aa14□□□□□ -0.17
PTPN6-220ENST00000543115 ERICH2A1L162 156 aa14□□□□□ -0.17
PTPN6-220ENST00000543115 MYCLP12524 364 aaPredicted RBP14□□□□□ -0.17
PTPN6-220ENST00000543115 RABGGTBP53611 331 aa14□□□□□ -0.17
PTPN6-220ENST00000543115 PTPN11Q06124 597 aaPredicted RBP14□□□□□ -0.17
PTPN6-220ENST00000543115 TMEM67Q5HYA8 995 aa14□□□□□ -0.17
PTPN6-220ENST00000543115 MTIF3Q9H2K0 278 aaKnown RBP14□□□□□ -0.17
PTPN6-220ENST00000543115 NKX2-4Q9H2Z4 354 aa14□□□□□ -0.17
PTPN6-220ENST00000543115 PRDM12Q9H4Q4 367 aa14□□□□□ -0.17
PTPN6-220ENST00000543115 MRVI1Q9Y6F6 885 aa14□□□□□ -0.17
PTPN6-220ENST00000543115 UNC80Q8N2C7 3258 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 SORBS3O60504 671 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 IQCF3P0C7M6 154 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 MYOGP15173 224 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 PGM5Q15124 567 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 RAB30Q15771 203 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 GDF6Q6KF10 455 aaPredicted RBP13.99□□□□□ -0.17
PTPN6-220ENST00000543115 VSIG10LQ86VR7 867 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 SKAP1Q86WV1 359 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 PIBF1Q8WXW3 757 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 GPKOWQ92917 476 aaPredicted RBP eCLIP13.99□□□□□ -0.17
PTPN6-220ENST00000543115 EMID1Q96A84 441 aaPredicted RBP13.99□□□□□ -0.17
PTPN6-220ENST00000543115 MYL10Q9BUA6 226 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 MAP3K20Q9NYL2 800 aaKnown RBP13.99□□□□□ -0.17
PTPN6-220ENST00000543115 MSRAQ9UJ68 235 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 SLC4A7Q9Y6M7 1214 aa13.99□□□□□ -0.17
PTPN6-220ENST00000543115 PNMA6FA0A0J9YX94 578 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 ZBBXA8MT70 800 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 PFKMP08237 780 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 ZNF286BP0CG31 522 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 CASTP20810 708 aaKnown RBP13.98□□□□□ -0.17
PTPN6-220ENST00000543115 SP2Q02086 613 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 ADGRE1Q14246 886 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 SART3Q15020 963 aaKnown RBP13.98□□□□□ -0.17
PTPN6-220ENST00000543115 PTGISQ16647 500 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 DGKDQ16760 1214 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 SESTD1Q86VW0 696 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 FCHSD1Q86WN1 690 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 DHX37Q8IY37 1157 aaKnown RBP13.98□□□□□ -0.17
PTPN6-220ENST00000543115 DHX38Q92620 1227 aaKnown RBP13.98□□□□□ -0.17
PTPN6-220ENST00000543115 LSG1Q9H089 658 aaKnown RBP13.98□□□□□ -0.17
PTPN6-220ENST00000543115 LY9Q9HBG7 655 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 NOD1Q9Y239 953 aa13.98□□□□□ -0.17
PTPN6-220ENST00000543115 GCOM1H8Y6P7 765 aaPredicted RBP13.97□□□□□ -0.17
PTPN6-220ENST00000543115 HAS3O00219 553 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 F2P00734 622 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 POLR2MP0CAP2 368 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 PSEN2P49810 448 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 LAMC2Q13753 1193 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 GPNMBQ14956 572 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 HSDL1Q3SXM5 330 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 MYSM1Q5VVJ2 828 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 CATIPQ7Z7H3 387 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 ZNF654Q8IZM8 581 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 SAMD3Q8N6K7 520 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 RETREG2Q8NC44 543 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 PPTC7Q8NI37 304 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 ALG1Q9BT22 464 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 BCAS3Q9H6U6 928 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 SLC28A3Q9HAS3 691 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 HDAC6Q9UBN7 1215 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 GTF2IRD1Q9UHL9 959 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 KIAA1217Q5T5P2 1943 aa13.97□□□□□ -0.17
PTPN6-220ENST00000543115 MYH6P13533 1939 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 A0A0C4DFX4 3053 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 SLC27A2O14975 620 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 PRC1O43663 620 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 GGPS1O95749 300 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 HOXD8P13378 290 aaPredicted RBP13.96□□□□□ -0.17
PTPN6-220ENST00000543115 ATP2A2P16615 1042 aaKnown RBP13.96□□□□□ -0.17
PTPN6-220ENST00000543115 UBA1P22314 1058 aaKnown RBP13.96□□□□□ -0.17
PTPN6-220ENST00000543115 CCND2P30279 289 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 RFC2P35250 354 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 MRPS9P82933 396 aaKnown RBP13.96□□□□□ -0.17
PTPN6-220ENST00000543115 BFSP2Q13515 415 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 HIC1Q14526 733 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 MFSD10Q14728 455 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 CELF3Q5SZQ8 465 aaKnown RBP13.96□□□□□ -0.17
PTPN6-220ENST00000543115 GAS2L1Q99501 681 aaPredicted RBP13.96□□□□□ -0.17
PTPN6-220ENST00000543115 ESYT1Q9BSJ8 1104 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 PRDM6Q9NQX0 595 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 SCN5AQ14524 2016 aa13.96□□□□□ -0.17
PTPN6-220ENST00000543115 TANC1Q9C0D5 1861 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 FRMPD4Q14CM0 1322 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 SH2B2O14492 632 aaPredicted RBP13.95□□□□□ -0.18
PTPN6-220ENST00000543115 DDAH1O94760 285 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 PLEKHA8P1O95397 391 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 RXRAP19793 462 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 ZNF200P98182 395 aaPredicted RBP13.95□□□□□ -0.18
PTPN6-220ENST00000543115 TRAF1Q13077 416 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 NECTIN1Q15223 517 aa13.95□□□□□ -0.18
PTPN6-220ENST00000543115 KIAA0753Q2KHM9 967 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms