RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 PES1O00541 588 aaKnown RBP12.09□□□□□ -0.47
NECAP1-206ENST00000542095 MMP14P50281 582 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 DNM2P50570 870 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 ARHGAP4P98171 946 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
NECAP1-206ENST00000542095 PSMD2Q13200 908 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 FKBP1CQ5VVH2 108 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 TMTC1Q8IUR5 882 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 NIM1KQ8IY84 436 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 AGBL3Q8NEM8 1001 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 ABHD10Q9NUJ1 306 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 ATAD5Q96QE3 1844 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 CNTNAP1P78357 1384 aa12.09□□□□□ -0.47
NECAP1-206ENST00000542095 STAT2P52630 851 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 KCNK18Q7Z418 384 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 MTMR14Q8NCE2 650 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 ZNF507Q8TCN5 953 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 CRYGNQ8WXF5 182 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 DDX12PQ92771 950 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 GJA10Q969M2 543 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 CNOT6LQ96LI5 555 aaKnown RBP12.08□□□□□ -0.47
NECAP1-206ENST00000542095 TUBGCP2Q9BSJ2 902 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 DESI2Q9BSY9 194 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 VEZTQ9HBM0 779 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 ZNF215Q9UL58 517 aaPredicted RBP12.08□□□□□ -0.47
NECAP1-206ENST00000542095 ZBTB21Q9ULJ3 1066 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 PRR12Q9ULL5 1215 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 ZNRF3Q9ULT6 936 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 TMX2Q9Y320 296 aa12.08□□□□□ -0.47
NECAP1-206ENST00000542095 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.47
NECAP1-206ENST00000542095 TBX3O15119 743 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 IDEP14735 1019 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 SREBF1P36956 1147 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 MTF1Q14872 753 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 ECM1Q16610 540 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 Q4G0T1 1027 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 RAD9BQ6WBX8 426 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 TEX2Q8IWB9 1127 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 SPICE1Q8N0Z3 855 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 GUF1Q8N442 669 aaKnown RBP12.08□□□□□ -0.48
NECAP1-206ENST00000542095 HPS3Q969F9 1004 aa12.08□□□□□ -0.48
NECAP1-206ENST00000542095 BMP2KQ9NSY1 1161 aaPredicted RBP12.08□□□□□ -0.48
NECAP1-206ENST00000542095 TBC1D12O60347 775 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 FGFR1OPO95684 399 aaKnown RBP12.07□□□□□ -0.48
NECAP1-206ENST00000542095 KRT9P35527 623 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 ECE1P42892 770 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 MTIF2P46199 727 aaKnown RBP12.07□□□□□ -0.48
NECAP1-206ENST00000542095 HAUS3Q68CZ6 603 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 CYP26C1Q6V0L0 522 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 FAM83AQ86UY5 434 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 SEMA6BQ9H3T3 888 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 ADGRG1Q9Y653 693 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 STK24Q9Y6E0 443 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 FER1L6Q2WGJ9 1857 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 PIK3CDO00329 1044 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 CASQ1P31415 396 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 EHHADHQ08426 723 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 PRR16Q569H4 304 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 DEFB132Q7Z7B7 95 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 NUP58Q9BVL2 599 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 SH2D4AQ9H788 454 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 KIAA1024Q9UPX6 916 aa12.07□□□□□ -0.48
NECAP1-206ENST00000542095 B4DLN1 442 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 GNG11P61952 73 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 LRRC63Q05C16 580 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 PDCL2Q8N4E4 241 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 ERMNQ8TAM6 284 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 ETNPPLQ8TBG4 499 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 ACER1Q8TDN7 264 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 CHURC1Q8WUH1 139 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 P2RX7Q99572 595 aaKnown RBP12.06□□□□□ -0.48
NECAP1-206ENST00000542095 NOC4LQ9BVI4 516 aaKnown RBP12.06□□□□□ -0.48
NECAP1-206ENST00000542095 SSBP05455 408 aaKnown RBP eCLIP12.06□□□□□ -0.48
NECAP1-206ENST00000542095 CIITAP33076 1130 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 TBC1D8BQ0IIM8 1120 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 COASYQ13057 564 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 TSR1Q2NL82 804 aaKnown RBP12.06□□□□□ -0.48
NECAP1-206ENST00000542095 FAM83BQ5T0W9 1011 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 FOXR2Q6PJQ5 311 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 RETREG2Q8NC44 543 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 DNAJC19Q96DA6 116 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 FAM20AQ96MK3 541 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 TSG101Q99816 390 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 TMEM39BQ9GZU3 492 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 MRPL44Q9H9J2 332 aaKnown RBP12.06□□□□□ -0.48
NECAP1-206ENST00000542095 PANK4Q9NVE7 773 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 CAPN11Q9UMQ6 739 aa12.06□□□□□ -0.48
NECAP1-206ENST00000542095 LUC7L2Q9Y383 392 aaKnown RBP12.06□□□□□ -0.48
NECAP1-206ENST00000542095 BRCA1P38398 1863 aaKnown RBP12.05□□□□□ -0.48
NECAP1-206ENST00000542095 TTC26A0AVF1 554 aa12.05□□□□□ -0.48
NECAP1-206ENST00000542095 POTEB3A0JP26 581 aa12.05□□□□□ -0.48
NECAP1-206ENST00000542095 POTECB2RU33 542 aa12.05□□□□□ -0.48
NECAP1-206ENST00000542095 E9PMD0 336 aa12.05□□□□□ -0.48
NECAP1-206ENST00000542095 RNF225M0QZC1 329 aaPredicted RBP12.05□□□□□ -0.48
NECAP1-206ENST00000542095 OPLAHO14841 1288 aa12.05□□□□□ -0.48
NECAP1-206ENST00000542095 URI1O94763 535 aaPredicted RBP12.05□□□□□ -0.48
NECAP1-206ENST00000542095 PLA2G4BP0C869 781 aa12.05□□□□□ -0.48
NECAP1-206ENST00000542095 ERVK-24P63145 666 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms