RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 LTBRP36941 435 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 RPL11P62913 178 aaKnown RBP5.93□□□□□ -1.46
SNHG1-217ENST00000541578 IFRD2Q12894 506 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-217ENST00000541578 KCNAB2Q13303 367 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 RAB33AQ14088 237 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 ZNF662Q6ZS27 426 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 ZCRB1Q8TBF4 217 aaKnown RBP5.93□□□□□ -1.46
SNHG1-217ENST00000541578 ALG3Q92685 438 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 PWWP2AQ96N64 755 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 RNF38Q9H0F5 515 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 TMEFF2Q9UIK5 374 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-217ENST00000541578 BICRAQ9NZM4 1560 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 hCG_2014768A0A024R1R8 64 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 A0A1W2PQU0 124 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 IQCA1LA6NCM1 817 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 MYO1BO43795 1136 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 CAPNS1P04632 268 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 ASGR2P07307 311 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 GFRA1P56159 465 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 PPP2R2AP63151 447 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 ACBD5Q5T8D3 534 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-217ENST00000541578 EGFLAMQ63HQ2 1017 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 JAZF1Q86VZ6 243 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 CCDC103Q8IW40 242 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 TEX2Q8IWB9 1127 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 PPIL6Q8IXY8 311 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 NLGN1Q8N2Q7 840 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 TMEM145Q8NBT3 493 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 SGSM3Q96HU1 749 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 DEPDC7Q96QD5 511 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 FAN1Q9Y2M0 1017 aa5.92□□□□□ -1.46
SNHG1-217ENST00000541578 ARNTLO00327 626 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 PPP1R12AO14974 1030 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-217ENST00000541578 ATF2P15336 505 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 BMP7P18075 431 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 GRIA2P42262 883 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 GTF2A2P52657 109 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 ANAPC15P60006 121 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 IGBP1P78318 339 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 HSP90AA2PQ14568 343 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-217ENST00000541578 TESK1Q15569 626 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 PRSS53Q2L4Q9 553 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 DENND5AQ6IQ26 1287 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 CEP68Q76N32 757 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 DCP2Q8IU60 420 aaKnown RBP5.91□□□□□ -1.46
SNHG1-217ENST00000541578 RCBTB1Q8NDN9 531 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 KCTD13Q8WZ19 329 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 TRMT2BQ96GJ1 504 aaKnown RBP5.91□□□□□ -1.46
SNHG1-217ENST00000541578 BCAS3Q9H6U6 928 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 PLA2G2DQ9UNK4 145 aa5.91□□□□□ -1.46
SNHG1-217ENST00000541578 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 PMLP29590 882 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 BCL6P41182 706 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 LIMS1P48059 325 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 FOXO4P98177 505 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 MAP4K2Q12851 820 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 SERINC3Q13530 473 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 SLC35F1Q5T1Q4 408 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 MROH9Q5TGP6 573 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 ST13P5Q8NFI4 369 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-217ENST00000541578 TMEM169Q96HH4 297 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 IER2Q9BTL4 223 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 AP5M1Q9H0R1 490 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 ZCCHC4Q9H5U6 513 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 PARD6AQ9NPB6 346 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 SNTG2Q9NY99 539 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 SIT1Q9Y3P8 196 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 PCDHA2Q9Y5H9 948 aa5.9□□□□□ -1.46
SNHG1-217ENST00000541578 FPR2P25090 351 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 LSAMPQ13449 338 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 PTPROQ16827 1216 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 VMACQ2NL98 169 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 TTLL10Q6ZVT0 673 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 LRP10Q7Z4F1 713 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 B3GNT8Q7Z7M8 397 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 RIOX2Q8IUF8 465 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 CPA5Q8WXQ8 436 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 SEC14L1Q92503 715 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 C1orf159Q96HA4 380 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 CHAMP1Q96JM3 812 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 X6R8D5 127 aa5.89□□□□□ -1.47
SNHG1-217ENST00000541578 PRODHO43272 600 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 DLX3O60479 287 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 CDC45O75419 566 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 INHBBP09529 407 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 LCP1P13796 627 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 MC3RP41968 323 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 SLC6A11P48066 632 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 CAP1Q01518 475 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 CACNB2Q08289 660 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-217ENST00000541578 LRRC47Q8N1G4 583 aaKnown RBP5.88□□□□□ -1.47
SNHG1-217ENST00000541578 Q8N1Y9 231 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 LINC01356Q8N9X3 169 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 MARCH10Q8NA82 808 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-217ENST00000541578 AARSD1Q9BTE6 412 aaKnown RBP5.88□□□□□ -1.47
SNHG1-217ENST00000541578 COA3Q9Y2R0 106 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-217ENST00000541578 NPFFR2Q9Y5X5 522 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 PMF1-BGLAPU3KQ54 211 aa5.88□□□□□ -1.47
SNHG1-217ENST00000541578 H7BY64 318 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 SGSM2O43147 1006 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms