RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 DUOX1Q9NRD9 1551 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 TRIM66O15016 1216 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 GYS1P13807 737 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 CEP112Q8N8E3 955 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 PSTPIP2Q9H939 334 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 SEPT11Q9NVA2 429 aaKnown RBP16.69■□□□□ 0.26
VARS2-211ENST00000541562 KBTBD4Q9NVX7 518 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 PCDHA12Q9UN75 941 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 CCNE1P24864 410 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 SEPT2Q15019 361 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 CCDC181Q5TID7 509 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 NDST4Q9H3R1 872 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 RSPH14Q9UHP6 348 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 LCMT1Q9UIC8 334 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 PCDHA1Q9Y5I3 950 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 BCL9LQ86UU0 1499 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 FGRP09769 529 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 SLC1A4P43007 532 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 TRAPPC10P48553 1259 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 KCNA1Q09470 495 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 KRT25Q7Z3Z0 450 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 TBC1D5Q92609 795 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 PACSIN1Q9BY11 444 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 JMJD4Q9H9V9 463 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 THRAP3Q9Y2W1 955 aaKnown RBP16.69■□□□□ 0.26
VARS2-211ENST00000541562 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
VARS2-211ENST00000541562 RSPH10B2B2RC85 870 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 RSPH10BP0C881 870 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 KCNJ6P48051 423 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 GUCY2FP51841 1108 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 TMEM266Q2M3C6 531 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 ARL6IP4Q66PJ3 421 aaKnown RBP16.68■□□□□ 0.26
VARS2-211ENST00000541562 GJB7Q6PEY0 223 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 CCDC174Q6PII3 467 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 FAM133AQ8N9E0 248 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 MTMR4Q9NYA4 1195 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 ARHGAP20Q9P2F6 1191 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 PRPF6O94906 941 aaKnown RBP16.68■□□□□ 0.26
VARS2-211ENST00000541562 CLSTN1O94985 981 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 TRADDQ15628 312 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 BEND6Q5SZJ8 279 aaPredicted RBP16.68■□□□□ 0.26
VARS2-211ENST00000541562 GPBP1Q86WP2 473 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 LSM14BQ9BX40 385 aaKnown RBP16.68■□□□□ 0.26
VARS2-211ENST00000541562 ZMYND12Q9H0C1 365 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 ADAMTS1Q9UHI8 967 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 KRT86O43790 486 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 MAGEA1P43355 309 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 NOP2P46087 812 aaKnown RBP16.68■□□□□ 0.26
VARS2-211ENST00000541562 DNM2P50570 870 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 NEDD1Q8NHV4 660 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 KCND1Q9NSA2 647 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 RGL1Q9NZL6 768 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 DMGDHQ9UI17 866 aaKnown RBP16.68■□□□□ 0.26
VARS2-211ENST00000541562 SERPINB13Q9UIV8 391 aa16.68■□□□□ 0.26
VARS2-211ENST00000541562 SEMA3EO15041 775 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 KIF20AO95235 890 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 ZNF76P36508 570 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 SND1Q7KZF4 910 aaKnown RBP eCLIP16.67■□□□□ 0.26
VARS2-211ENST00000541562 KLHL7Q8IXQ5 586 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 LRRC1Q9BTT6 524 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 LEMD3Q9Y2U8 911 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 TOM1O60784 492 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 RHOBTB3O94955 611 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 CYLC1P35663 651 aaPredicted RBP16.67■□□□□ 0.26
VARS2-211ENST00000541562 MIIPQ5JXC2 388 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 NAA35Q5VZE5 725 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 TDRD3Q9H7E2 651 aaKnown RBP16.67■□□□□ 0.26
VARS2-211ENST00000541562 PANK4Q9NVE7 773 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 PCDHB13Q9Y5F0 798 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 DDTLA6NHG4 134 aaPredicted RBP16.67■□□□□ 0.26
VARS2-211ENST00000541562 CHRNA5P30532 468 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 CASP5P51878 434 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 KIF11P52732 1056 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 MIGA2Q7L4E1 593 aa16.67■□□□□ 0.26
VARS2-211ENST00000541562 SECISBP2LQ93073 1101 aaKnown RBP16.67■□□□□ 0.26
VARS2-211ENST00000541562 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.67■□□□□ 0.26
VARS2-211ENST00000541562 C16orf86Q6ZW13 317 aa16.66■□□□□ 0.26
VARS2-211ENST00000541562 NAA15Q9BXJ9 866 aaKnown RBP16.66■□□□□ 0.26
VARS2-211ENST00000541562 TCP10L2B9ZVM9 353 aa16.66■□□□□ 0.26
VARS2-211ENST00000541562 M0R2N6 131 aa16.66■□□□□ 0.26
VARS2-211ENST00000541562 CFBP00751 764 aa16.66■□□□□ 0.26
VARS2-211ENST00000541562 RBM17Q96I25 401 aaKnown RBP16.66■□□□□ 0.26
VARS2-211ENST00000541562 FAM204AQ9H8W3 233 aa16.66■□□□□ 0.26
VARS2-211ENST00000541562 PAPPAQ13219 1627 aa16.66■□□□□ 0.26
VARS2-211ENST00000541562 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
VARS2-211ENST00000541562 EHHADHQ08426 723 aa16.66■□□□□ 0.26
VARS2-211ENST00000541562 ZNF507Q8TCN5 953 aa16.66■□□□□ 0.26
VARS2-211ENST00000541562 CAPN11Q9UMQ6 739 aa16.66■□□□□ 0.26
VARS2-211ENST00000541562 ROBO1Q9Y6N7 1651 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 ERLIN1O75477 346 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 RCAN1P53805 252 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 HDXQ7Z353 690 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 STRCQ7RTU9 1775 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 EDIL3O43854 480 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 SRGNP10124 158 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 ATP1A2P50993 1020 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 ZSCAN26Q16670 478 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 CDC42EP5Q6NZY7 148 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 TRIM31Q9BZY9 425 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms