RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TTC36A6NLP5 189 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 hCG_1984214I3L0E3 225 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 NR1H3Q13133 447 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 PTPN21Q16825 1174 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 NXNQ6DKJ4 435 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 ZNF713Q8N859 430 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 RBM17Q96I25 401 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 SH3GL3Q99963 347 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 ELAC2Q9BQ52 826 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 NDST4Q9H3R1 872 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 LGALS16A8MUM7 142 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 KLRF2D3W0D1 207 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 ESRRAP11474 423 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 PPP2R2AP63151 447 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 KRT81Q14533 505 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 NAA30Q147X3 362 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 SLC17A8Q8NDX2 589 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 KLC4Q9NSK0 619 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 PACSIN2Q9UNF0 486 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 ZSCAN20P17040 1043 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 MSH2P43246 934 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 NUGGCQ68CJ6 796 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 RDH13Q8NBN7 331 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 HAUS2Q9NVX0 235 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 ATP7BP35670 1465 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 ADAMTS2O95450 1211 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 PDE6BP35913 854 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 PSMC2P35998 433 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 EIF6P56537 245 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 YWHAGP61981 247 aaKnown RBP eCLIP16.24■□□□□ 0.194e-6■■□□□ 13.3
SMARCA4-207ENST00000541122 IRX1P78414 480 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 CAPN12Q6ZSI9 719 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 OTUD6AQ7L8S5 288 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 TBC1D22AQ8WUA7 517 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 ZCCHC17Q9NP64 241 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 TMOD4Q9NZQ9 345 aa16.24■□□□□ 0.19
SMARCA4-207ENST00000541122 A1BGP04217 495 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 TMEM60Q9H2L4 133 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 ANKRD65E5RJM6 399 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 NT5C2P49902 561 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 CYP27A1Q02318 531 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 SEMA3FQ13275 785 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 TTLL12Q14166 644 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 DHX40Q8IX18 779 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.23■□□□□ 0.193e-6■■■■■ 38.6
SMARCA4-207ENST00000541122 ATP6V1G3Q96LB4 118 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 SCINQ9Y6U3 715 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 PRPF3O43395 683 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 GCFC2P16383 781 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 PHEXP78562 749 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 DDB1Q16531 1140 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 RTCBQ9Y3I0 505 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 RFX7Q2KHR2 1363 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 SH3BP5O60239 455 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 MAEAQ7L5Y9 396 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 PPM1KQ8N3J5 372 aa16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 TLR7Q9NYK1 1049 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-207ENST00000541122 PTPREP23469 700 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 PTK2Q05397 1052 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 GPKOWQ92917 476 aaPredicted RBP eCLIP16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 K7ENM7 598 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 MT-ND3P03897 115 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 CHGBP05060 677 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 RINT1Q6NUQ1 792 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 SERPINI1Q99574 410 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 KCNF1Q9H3M0 494 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 YY1AP1Q9H869 796 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 IFT122Q9HBG6 1241 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 ATG3Q9NT62 314 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 WDR19Q8NEZ3 1342 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 IPO5O00410 1097 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 PDZD4Q76G19 769 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 RNF34Q969K3 372 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 ABTB1Q969K4 478 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 CARD10Q9BWT7 1032 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 PITPNM3Q9BZ71 974 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 MBD5Q9P267 1494 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 STK36Q9NRP7 1315 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 EXOC1LA0A1B0GW35 172 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 MEFVO15553 781 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 SP4Q02446 784 aa16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 TOB2Q14106 344 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 CAPRIN2Q6IMN6 1127 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-207ENST00000541122 M0R2C6 588 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 UFL1O94874 794 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 FOSP01100 380 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 SPARCL1Q14515 664 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 MMEL1Q495T6 779 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 RHOT2Q8IXI1 618 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 ZNF653Q96CK0 615 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 NT5C1BQ96P26 610 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 MAPK4P31152 587 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 SLCO1A2P46721 670 aa16.21■□□□□ 0.19
SMARCA4-207ENST00000541122 SATB1Q01826 763 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms