RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 GSG1L2A8MUP6 293 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 LSM1O15116 133 aaKnown RBP9.8□□□□□ -0.84
TCF4-207ENST00000540999 SART1O43290 800 aaKnown RBP9.8□□□□□ -0.84
TCF4-207ENST00000540999 CHRNA5P30532 468 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 HSD17B7P56937 341 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 ARPC4P59998 168 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 KRT32Q14532 448 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 C11orf74Q86VG3 221 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 FLAD1Q8NFF5 587 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 RABGGTAQ92696 567 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 BRF1Q92994 677 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 SPAG5Q96R06 1193 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 CHD4Q14839 1912 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 GTPBP10A4D1E9 387 aaKnown RBP9.8□□□□□ -0.84
TCF4-207ENST00000540999 RASA4BC9J798 803 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 C6orf229H3BNL8 230 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 ZNF213O14771 459 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 PPEF1O14829 653 aaPredicted RBP9.8□□□□□ -0.84
TCF4-207ENST00000540999 RIMBP2O15034 1052 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 ALOX15P16050 662 aaPredicted RBP9.8□□□□□ -0.84
TCF4-207ENST00000540999 BPIFB3P59826 476 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 EVX2Q03828 476 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 CTDSPL2Q05D32 466 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 MRPL28Q13084 256 aaKnown RBP9.8□□□□□ -0.84
TCF4-207ENST00000540999 ZBTB17Q13105 803 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 IMMTQ16891 758 aaKnown RBP9.8□□□□□ -0.84
TCF4-207ENST00000540999 IFNL3Q8IZI9 196 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 TBC1D16Q8TBP0 767 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 PAWRQ96IZ0 340 aaKnown RBP9.8□□□□□ -0.84
TCF4-207ENST00000540999 CRAMP1Q96RY5 1269 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 STK32BQ9NY57 414 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 LEMD3Q9Y2U8 911 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 SLC4A4Q9Y6R1 1079 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 RGPD3A6NKT7 1758 aaPredicted RBP9.8□□□□□ -0.84
TCF4-207ENST00000540999 RGPD4Q7Z3J3 1758 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 BAZ2AQ9UIF9 1905 aaKnown RBP9.8□□□□□ -0.84
TCF4-207ENST00000540999 NDUFB5O43674 189 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 IVLP07476 585 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 PAPOLAP51003 745 aaKnown RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 EXOSC10Q01780 885 aaKnown RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 APOBRQ0VD83 1088 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 CDCA2Q69YH5 1023 aaPredicted RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 NAA16Q6N069 864 aaPredicted RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 DHX32Q7L7V1 743 aaKnown RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 DAAM2Q86T65 1068 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 IPCEF1Q8WWN9 437 aaPredicted RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 NSUN4Q96CB9 384 aaKnown RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 INTS4Q96HW7 963 aaKnown RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 JPH2Q9BR39 696 aaPredicted RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 PARD6BQ9BYG5 372 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 PCDH12Q9NPG4 1184 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 GGA1Q9UJY5 639 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 TRPC6Q9Y210 931 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 RAB11FIP4Q86YS3 637 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 GIMAP8Q8ND71 665 aaPredicted RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 TNIP2Q8NFZ5 429 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 EPSTI1Q96J88 318 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 RIOK1Q9BRS2 568 aaKnown RBP9.79□□□□□ -0.84
TCF4-207ENST00000540999 TANGO6Q9C0B7 1094 aa9.79□□□□□ -0.84
TCF4-207ENST00000540999 CYP2D7A0A087X1C5 515 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 GOLGA6L10A0A0M3HER8 536 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 ANTXR2P58335 489 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 BTG3Q14201 252 aaPredicted RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 LBRQ14739 615 aaKnown RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 DIXDC1Q155Q3 683 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 SH2D4BQ5SQS7 431 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 CCDC122Q5T0U0 273 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 CAPRIN2Q6IMN6 1127 aaKnown RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 LINC00469Q8N7U9 141 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 ZNF713Q8N859 430 aaPredicted RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 TSPY26PQ9H489 355 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 AATFQ9NY61 560 aaKnown RBP eCLIP9.78□□□□□ -0.84
TCF4-207ENST00000540999 NEDD4P46934 1319 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 MAGEB6P1A0A0J9YX57 407 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 TMEM221A6NGB7 291 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 NPR1P16066 1061 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 ENDOUP21128 410 aaKnown RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 GJB2P29033 226 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 IQCA1Q86XH1 822 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 C2CD5Q86YS7 1000 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 RAVER1Q8IY67 606 aaKnown RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 CCDC150Q8NCX0 1101 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 ZNF397Q8NF99 534 aaPredicted RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 TMC2Q8TDI7 906 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 GIPC2Q8TF65 315 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 NAPBQ9H115 298 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 CD209Q9NNX6 404 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 TUBA8Q9NY65 449 aaPredicted RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 TTF2Q9UNY4 1162 aaKnown RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 USTQ9Y2C2 406 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 ZNF510Q9Y2H8 683 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 LUC7L2Q9Y383 392 aaKnown RBP9.78□□□□□ -0.84
TCF4-207ENST00000540999 SLX4Q8IY92 1834 aa9.78□□□□□ -0.84
TCF4-207ENST00000540999 B4E1Z4 1266 aa9.77□□□□□ -0.84
TCF4-207ENST00000540999 SEMA3EO15041 775 aa9.77□□□□□ -0.84
TCF4-207ENST00000540999 TCF7P36402 384 aaPredicted RBP9.77□□□□□ -0.84
TCF4-207ENST00000540999 BAG6P46379 1132 aa9.77□□□□□ -0.84
TCF4-207ENST00000540999 SKOR2Q2VWA4 1001 aaPredicted RBP9.77□□□□□ -0.84
TCF4-207ENST00000540999 CYB5R4Q7L1T6 521 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms