RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 PTPN11Q06124 597 aaPredicted RBP24.26■■□□□ 1.47
CHFR-217ENST00000540537 COL9A3Q14050 684 aaPredicted RBP24.26■■□□□ 1.47
CHFR-217ENST00000540537 PGM5Q15124 567 aa24.26■■□□□ 1.47
CHFR-217ENST00000540537 RNF20Q5VTR2 975 aa24.26■■□□□ 1.47
CHFR-217ENST00000540537 VSIG10LQ86VR7 867 aa24.26■■□□□ 1.47
CHFR-217ENST00000540537 EMID1Q96A84 441 aaPredicted RBP24.26■■□□□ 1.47
CHFR-217ENST00000540537 GUCD1Q96NT3 240 aa24.26■■□□□ 1.47
CHFR-217ENST00000540537 MRVI1Q9Y6F6 885 aa24.26■■□□□ 1.47
CHFR-217ENST00000540537 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.25■■□□□ 1.47
CHFR-217ENST00000540537 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.25■■□□□ 1.47
CHFR-217ENST00000540537 CDC45O75419 566 aa24.25■■□□□ 1.47
CHFR-217ENST00000540537 CALM1P0DP23 149 aa24.25■■□□□ 1.47
CHFR-217ENST00000540537 CALM2P0DP24 149 aa24.25■■□□□ 1.47
CHFR-217ENST00000540537 CALM3P0DP25 149 aa24.25■■□□□ 1.47
CHFR-217ENST00000540537 MYCLP12524 364 aaPredicted RBP24.25■■□□□ 1.47
CHFR-217ENST00000540537 RASIP1Q5U651 963 aa24.25■■□□□ 1.47
CHFR-217ENST00000540537 KCNV1Q6PIU1 500 aa24.25■■□□□ 1.47
CHFR-217ENST00000540537 RRP36Q96EU6 259 aaKnown RBP24.25■■□□□ 1.47
CHFR-217ENST00000540537 MYH7BA7E2Y1 1941 aa24.24■■□□□ 1.47
CHFR-217ENST00000540537 TMEM265A0A087WTH1 108 aa24.24■■□□□ 1.47
CHFR-217ENST00000540537 RGS20O76081 388 aa24.24■■□□□ 1.47
CHFR-217ENST00000540537 ACRP10323 421 aa24.24■■□□□ 1.47
CHFR-217ENST00000540537 FAM47CQ5HY64 1035 aa24.24■■□□□ 1.47
CHFR-217ENST00000540537 ZNF365Q70YC5 407 aa24.24■■□□□ 1.47
CHFR-217ENST00000540537 PIBF1Q8WXW3 757 aa24.24■■□□□ 1.47
CHFR-217ENST00000540537 FAM161BQ96MY7 647 aa24.24■■□□□ 1.47
CHFR-217ENST00000540537 WNT8AQ9H1J5 351 aa24.24■■□□□ 1.47
CHFR-217ENST00000540537 SEC63Q9UGP8 760 aaKnown RBP24.24■■□□□ 1.47
CHFR-217ENST00000540537 CYP2C9P11712 490 aa24.23■■□□□ 1.47
CHFR-217ENST00000540537 CASTP20810 708 aaKnown RBP24.23■■□□□ 1.47
CHFR-217ENST00000540537 CCND2P30279 289 aa24.23■■□□□ 1.47
CHFR-217ENST00000540537 CCL23P55773 120 aa24.23■■□□□ 1.47
CHFR-217ENST00000540537 LAMC2Q13753 1193 aa24.23■■□□□ 1.47
CHFR-217ENST00000540537 SGMS1Q86VZ5 419 aa24.23■■□□□ 1.47
CHFR-217ENST00000540537 FCHSD1Q86WN1 690 aa24.23■■□□□ 1.47
CHFR-217ENST00000540537 IL31RAQ8NI17 732 aa24.23■■□□□ 1.47
CHFR-217ENST00000540537 SEMA6BQ9H3T3 888 aa24.23■■□□□ 1.47
CHFR-217ENST00000540537 SLC12A7Q9Y666 1083 aa24.23■■□□□ 1.47
CHFR-217ENST00000540537 FRMPD4Q14CM0 1322 aa24.22■■□□□ 1.47
CHFR-217ENST00000540537 PLEKHA8P1O95397 391 aa24.22■■□□□ 1.47
CHFR-217ENST00000540537 DGKDQ16760 1214 aa24.22■■□□□ 1.47
CHFR-217ENST00000540537 SRBD1Q8N5C6 995 aaKnown RBP24.22■■□□□ 1.47
CHFR-217ENST00000540537 PPTC7Q8NI37 304 aa24.22■■□□□ 1.47
CHFR-217ENST00000540537 HERVK_113Q902F9 699 aa24.22■■□□□ 1.47
CHFR-217ENST00000540537 FGBP02675 491 aa24.21■■□□□ 1.47
CHFR-217ENST00000540537 TGFB3P10600 412 aa24.21■■□□□ 1.47
CHFR-217ENST00000540537 TSGA10IPQ3SY00 556 aa24.21■■□□□ 1.47
CHFR-217ENST00000540537 SESTD1Q86VW0 696 aa24.21■■□□□ 1.47
CHFR-217ENST00000540537 DHX37Q8IY37 1157 aaKnown RBP24.21■■□□□ 1.47
CHFR-217ENST00000540537 RPUSD2Q8IZ73 545 aaKnown RBP24.21■■□□□ 1.47
CHFR-217ENST00000540537 KAT2BQ92831 832 aa24.21■■□□□ 1.47
CHFR-217ENST00000540537 CCDC136Q96JN2 1154 aa24.21■■□□□ 1.47
CHFR-217ENST00000540537 NEK1Q96PY6 1258 aa24.21■■□□□ 1.47
CHFR-217ENST00000540537 LRRC2Q9BYS8 371 aa24.21■■□□□ 1.47
CHFR-217ENST00000540537 MTIF3Q9H2K0 278 aaKnown RBP24.21■■□□□ 1.47
CHFR-217ENST00000540537 TTYH1Q9H313 450 aaPredicted RBP24.21■■□□□ 1.47
CHFR-217ENST00000540537 RXRAP19793 462 aa24.2■■□□□ 1.46
CHFR-217ENST00000540537 PIK3CDO00329 1044 aa24.19■■□□□ 1.46
CHFR-217ENST00000540537 PITPNM1O00562 1244 aa24.19■■□□□ 1.46
CHFR-217ENST00000540537 STAM2O75886 525 aa24.19■■□□□ 1.46
CHFR-217ENST00000540537 HOXD8P13378 290 aaPredicted RBP24.19■■□□□ 1.46
CHFR-217ENST00000540537 DNAJB2P25686 324 aa24.19■■□□□ 1.46
CHFR-217ENST00000540537 CELF3Q5SZQ8 465 aaKnown RBP24.19■■□□□ 1.46
CHFR-217ENST00000540537 MYSM1Q5VVJ2 828 aa24.19■■□□□ 1.46
CHFR-217ENST00000540537 FANCBQ8NB91 859 aa24.19■■□□□ 1.46
CHFR-217ENST00000540537 PPP1R13LQ8WUF5 828 aa24.19■■□□□ 1.46
CHFR-217ENST00000540537 CUL5Q93034 780 aa24.19■■□□□ 1.46
CHFR-217ENST00000540537 SCLYQ96I15 445 aa24.19■■□□□ 1.46
CHFR-217ENST00000540537 KATNAL1Q9BW62 490 aa24.19■■□□□ 1.46
CHFR-217ENST00000540537 GGPS1O95749 300 aa24.18■■□□□ 1.46
CHFR-217ENST00000540537 PFKMP08237 780 aa24.18■■□□□ 1.46
CHFR-217ENST00000540537 UBA1P22314 1058 aaKnown RBP24.18■■□□□ 1.46
CHFR-217ENST00000540537 EXOSC10Q01780 885 aaKnown RBP24.18■■□□□ 1.46
CHFR-217ENST00000540537 KRT32Q14532 448 aa24.18■■□□□ 1.46
CHFR-217ENST00000540537 TMTC3Q6ZXV5 915 aa24.18■■□□□ 1.46
CHFR-217ENST00000540537 SLC17A8Q8NDX2 589 aa24.18■■□□□ 1.46
CHFR-217ENST00000540537 SMARCC2Q8TAQ2 1214 aa24.18■■□□□ 1.46
CHFR-217ENST00000540537 CDX2Q99626 313 aaPredicted RBP24.18■■□□□ 1.46
CHFR-217ENST00000540537 NOD1Q9Y239 953 aa24.18■■□□□ 1.46
CHFR-217ENST00000540537 MEIS2O14770 477 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 F2P00734 622 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 RFC2P35250 354 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 CHMP4BP1P59074 171 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 SP2Q02086 613 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 GNPTABQ3T906 1256 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 USP17L6PQ6QN14 398 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 SYNE3Q6ZMZ3 975 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 DHX32Q7L7V1 743 aaKnown RBP24.17■■□□□ 1.46
CHFR-217ENST00000540537 MICU3Q86XE3 530 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 RAB11FIP4Q86YS3 637 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 RASEFQ8IZ41 740 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 CMTR1Q8N1G2 835 aaKnown RBP24.17■■□□□ 1.46
CHFR-217ENST00000540537 VWCEQ96DN2 955 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 SPATA33Q96N06 139 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 INPP4AQ96PE3 977 aaPredicted RBP24.17■■□□□ 1.46
CHFR-217ENST00000540537 CXXC1Q9P0U4 656 aaPredicted RBP24.17■■□□□ 1.46
CHFR-217ENST00000540537 TANC1Q9C0D5 1861 aa24.17■■□□□ 1.46
CHFR-217ENST00000540537 PPFIA4O75335 1185 aa24.16■■□□□ 1.46
CHFR-217ENST00000540537 ICAM3P32942 547 aa24.16■■□□□ 1.46
CHFR-217ENST00000540537 PSEN2P49810 448 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms