RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 PTGS1P23219 599 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 RPS6KB1P23443 525 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 CST5P28325 142 aaPredicted RBP13.25□□□□□ -0.29
TMEM258-205ENST00000540434 APOBRQ0VD83 1088 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 BAATQ14032 418 aaPredicted RBP13.25□□□□□ -0.29
TMEM258-205ENST00000540434 SART3Q15020 963 aaKnown RBP13.25□□□□□ -0.29
TMEM258-205ENST00000540434 CSPP1Q1MSJ5 1256 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 TMEM63BQ5T3F8 832 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 SLC30A10Q6XR72 485 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 NFXL1Q6ZNB6 911 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 CATIPQ7Z7H3 387 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 GJD3Q8N144 294 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 ANKRD35Q8N283 1001 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 ARNTL2Q8WYA1 636 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 VTI1AQ96AJ9 217 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 VWCEQ96DN2 955 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 DDX11Q96FC9 970 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 COL20A1Q9P218 1284 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 PCDHA11Q9Y5I1 949 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 GTF3C3Q9Y5Q9 886 aa13.25□□□□□ -0.29
TMEM258-205ENST00000540434 WDR19Q8NEZ3 1342 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 ZBBXA8MT70 800 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 ADCY6O43306 1168 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 DTNBO60941 627 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 DUSP11O75319 330 aaKnown RBP13.24□□□□□ -0.29
TMEM258-205ENST00000540434 ASGR1P07306 291 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 CASTP20810 708 aaKnown RBP13.24□□□□□ -0.29
TMEM258-205ENST00000540434 CDC27P30260 824 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 COPB2P35606 906 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 TOB2Q14106 344 aaPredicted RBP13.24□□□□□ -0.29
TMEM258-205ENST00000540434 KRT32Q14532 448 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 TKFCQ3LXA3 575 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 APOA5Q6Q788 366 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 NSMFQ6X4W1 530 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 HOMER1Q86YM7 354 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 CCDC82Q8N4S0 544 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 GLT1D1Q96MS3 346 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 UPF3BQ9BZI7 483 aaKnown RBP13.24□□□□□ -0.29
TMEM258-205ENST00000540434 KATNBL1Q9H079 304 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 SLC4A7Q9Y6M7 1214 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 CFAP54Q96N23 3096 aa13.24□□□□□ -0.29
TMEM258-205ENST00000540434 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 EPB41L2O43491 1005 aaKnown RBP13.23□□□□□ -0.29
TMEM258-205ENST00000540434 DHX16O60231 1041 aaKnown RBP13.23□□□□□ -0.29
TMEM258-205ENST00000540434 DDAH1O94760 285 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 IL9P15248 144 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 SSTR3P32745 418 aaPredicted RBP13.23□□□□□ -0.29
TMEM258-205ENST00000540434 FUT2Q10981 343 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 BLOC1S2Q6QNY1 142 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 MAMDC4Q6UXC1 1216 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 MICU3Q86XE3 530 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 FAM178BQ8IXR5 827 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 FANCBQ8NB91 859 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 BRF1Q92994 677 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 MAP3K14Q99558 947 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 AGXT2Q9BYV1 514 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 FBXO40Q9UH90 709 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 FAM184BQ9ULE4 1060 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 SLC12A7Q9Y666 1083 aa13.23□□□□□ -0.29
TMEM258-205ENST00000540434 A0A0U1RQG5 324 aaPredicted RBP13.22□□□□□ -0.29
TMEM258-205ENST00000540434 KLF18A0A0U1RQI7 1052 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 ZBTB5O15062 677 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 CTAGE5O15320 804 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 PPFIA3O75145 1194 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 ATP2A2P16615 1042 aaKnown RBP13.22□□□□□ -0.29
TMEM258-205ENST00000540434 ADD1P35611 737 aaKnown RBP13.22□□□□□ -0.29
TMEM258-205ENST00000540434 RPS6P62753 249 aaKnown RBP13.22□□□□□ -0.29
TMEM258-205ENST00000540434 GRB10Q13322 594 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 RUFY3Q7L099 469 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 FBXO11Q86XK2 927 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 TMTC2Q8N394 836 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 MSL3Q8N5Y2 521 aaKnown RBP13.22□□□□□ -0.29
TMEM258-205ENST00000540434 SLC43A3Q8NBI5 491 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 SCLYQ96I15 445 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 UPF3AQ9H1J1 476 aaKnown RBP13.22□□□□□ -0.29
TMEM258-205ENST00000540434 MTIF3Q9H2K0 278 aaKnown RBP13.22□□□□□ -0.29
TMEM258-205ENST00000540434 SCN5AQ14524 2016 aa13.22□□□□□ -0.29
TMEM258-205ENST00000540434 PTPDC1A2A3K4 754 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 RBAK-RBAKDNI3L0D1 243 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 LPXNO60711 386 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 CALML3P27482 149 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 GJA9P57773 515 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 NKX3-2P78367 333 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 TTLL4Q14679 1199 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 TMTC3Q6ZXV5 915 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 ARMCX2Q7L311 632 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 PCSK9Q8NBP7 692 aaKnown RBP13.21□□□□□ -0.29
TMEM258-205ENST00000540434 TAAR1Q96RJ0 339 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 SPZ1Q9BXG8 430 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 WNT8AQ9H1J5 351 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 HIPK3Q9H422 1215 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 PDGFCQ9NRA1 345 aa13.21□□□□□ -0.29
TMEM258-205ENST00000540434 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.21□□□□□ -0.29
TMEM258-205ENST00000540434 TRIOO75962 3097 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 PNMA6FA0A0J9YX94 578 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-205ENST00000540434 ADAMTS3O15072 1205 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 TLR3O15455 904 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms