RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CCDC83Q8IWF9 413 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 CCDC148Q8NFR7 591 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 SMARCC2Q8TAQ2 1214 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 NSUN6Q8TEA1 469 aaKnown RBP8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 CCDC12Q8WUD4 166 aaPredicted RBP8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 CUL5Q93034 780 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 AIFM3Q96NN9 605 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 RMDN3Q96TC7 470 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 PDCD2LQ9BRP1 358 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 ZMYND12Q9H0C1 365 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 RNF208Q9H0X6 261 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 PSTPIP2Q9H939 334 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 HMX1Q9NP08 348 aaPredicted RBP8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 RIC8AQ9NPQ8 531 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 SH3GLB2Q9NR46 395 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 VPS54Q9P1Q0 977 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 CNPY2Q9Y2B0 182 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 SMCO2A6NFE2 343 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 CCDC85CA6NKD9 419 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 ADAMTS3O15072 1205 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 TNRC18O15417 2968 aaPredicted RBP8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 SEPT4O43236 478 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 ADCY6O43306 1168 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 JAK2O60674 1132 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 GJB1P08034 283 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 EIF2AK2P19525 551 aaKnown RBP8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 MCM2P49736 904 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 PDE4DQ08499 809 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 ACVR2BQ13705 512 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 PGM5Q15124 567 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 NPY5RQ15761 445 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 PRAMEF19Q5SWL8 479 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 ARHGEF16Q5VV41 709 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 FCHSD1Q86WN1 690 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 FBXO16Q8IX29 292 aaPredicted RBP8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 FAM177A1Q8N128 213 aaPredicted RBP8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 IL31RAQ8NI17 732 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 TMX3Q96JJ7 454 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 IWS1Q96ST2 819 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 MPHOSPH6Q99547 160 aaKnown RBP8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 LLPHQ9BRT6 129 aaKnown RBP8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 GLT8D2Q9H1C3 349 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 ABHD16BQ9H3Z7 469 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 VTA1Q9NP79 307 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 ORC3Q9UBD5 711 aaPredicted RBP8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 DDX20Q9UHI6 824 aaKnown RBP8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 ZHX1Q9UKY1 873 aaPredicted RBP8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 WDR81Q562E7 1941 aa8.01□□□□□ -1.13
LPCAT3-209ENST00000540060 B4DLN1 442 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 MSCO60682 206 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 NR3C2P08235 984 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 AKR1A1P14550 325 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 CNGA1P29973 690 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 GJA8P48165 433 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 MRPL12P52815 198 aaKnown RBP8□□□□□ -1.13
LPCAT3-209ENST00000540060 SOX10P56693 466 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 AP3B2Q13367 1082 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 CCDC144BQ3MJ40 725 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 TAPT1Q6NXT6 567 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 EEPD1Q7L9B9 569 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 REXO1Q8N1G1 1221 aaKnown RBP8□□□□□ -1.13
LPCAT3-209ENST00000540060 ZNF710Q8N1W2 664 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 DAGLBQ8NCG7 672 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 U2AF1L4Q8WU68 220 aaKnown RBP8□□□□□ -1.13
LPCAT3-209ENST00000540060 WASF1Q92558 559 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 SPOCK2Q92563 424 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 LENG1Q96BZ8 264 aaPredicted RBP8□□□□□ -1.13
LPCAT3-209ENST00000540060 DEFB118Q96PH6 123 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 PHF20Q9BVI0 1012 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 ANO3Q9BYT9 981 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 CRISPLD2Q9H0B8 497 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 C6orf50Q9HD87 102 aa8□□□□□ -1.13
LPCAT3-209ENST00000540060 KIAA0100Q14667 2235 aaKnown RBP8□□□□□ -1.13
LPCAT3-209ENST00000540060 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 RBM47A0AV96 593 aaKnown RBP7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 SPDYE3A6NKU9 549 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 M0R2N6 131 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 SGPL1O95470 568 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 FOSP01100 380 aaPredicted RBP7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 GNA11P29992 359 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 CCND2P30279 289 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 ADCYAP1R1P41586 468 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 MRPS9P82933 396 aaKnown RBP7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 HMGN5P82970 282 aaKnown RBP7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 STXBP2Q15833 593 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 PCNX4Q63HM2 1172 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 VSIG10LQ86VR7 867 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 BICD2Q8TD16 824 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 CRYGNQ8WXF5 182 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 PGBD1Q96JS3 809 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 ALG1Q9BT22 464 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 PDGFCQ9NRA1 345 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 GJB4Q9NTQ9 266 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 TMEM260Q9NX78 707 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 OGDHLQ9ULD0 1010 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 FAM184BQ9ULE4 1060 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 PCDHA6Q9UN73 950 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 PCDHA4Q9UN74 947 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 PCDHA8Q9Y5H6 950 aa7.99□□□□□ -1.13
LPCAT3-209ENST00000540060 SYNRGQ9UMZ2 1314 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms