RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 SPP2Q13103 211 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 PSMD2Q13200 908 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 FILIP1LQ4L180 1135 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 ILDR2Q71H61 639 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 KRT26Q7Z3Y9 468 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 ADSSL1Q8N142 457 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 DCPSQ96C86 337 aaKnown RBP19.22■□□□□ 0.67
LTBR-207ENST00000539925 PNMA5Q96PV4 448 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 EMILIN3Q9NT22 766 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 FBXO28Q9NVF7 368 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.22■□□□□ 0.67
LTBR-207ENST00000539925 ZC3H4Q9UPT8 1303 aaKnown RBP19.21■□□□□ 0.67
LTBR-207ENST00000539925 BICDL2A1A5D9 508 aa19.21■□□□□ 0.67
LTBR-207ENST00000539925 ATP1A3P13637 1013 aa19.21■□□□□ 0.67
LTBR-207ENST00000539925 HOXA13P31271 388 aaPredicted RBP19.21■□□□□ 0.67
LTBR-207ENST00000539925 KLHL10Q6JEL2 608 aa19.21■□□□□ 0.67
LTBR-207ENST00000539925 DPY19L2Q6NUT2 758 aa19.21■□□□□ 0.67
LTBR-207ENST00000539925 UNC13DQ70J99 1090 aa19.21■□□□□ 0.67
LTBR-207ENST00000539925 FCHSD1Q86WN1 690 aa19.21■□□□□ 0.67
LTBR-207ENST00000539925 PLIN2Q99541 437 aa19.21■□□□□ 0.67
LTBR-207ENST00000539925 RPAP3Q9H6T3 665 aaPredicted RBP19.21■□□□□ 0.67
LTBR-207ENST00000539925 BLOC1S4Q9NUP1 217 aa19.21■□□□□ 0.67
LTBR-207ENST00000539925 SBF1O95248 1867 aa19.21■□□□□ 0.67
LTBR-207ENST00000539925 MYPNQ86TC9 1320 aa19.21■□□□□ 0.67
LTBR-207ENST00000539925 CD44P16070 742 aaKnown RBP19.2■□□□□ 0.66
LTBR-207ENST00000539925 MUTP22033 750 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 CDKAL1Q5VV42 579 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 NIPA1Q7RTP0 329 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 CCDC84Q86UT8 332 aaPredicted RBP19.2■□□□□ 0.66
LTBR-207ENST00000539925 SULF1Q8IWU6 871 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 LENG9Q96B70 501 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 TMOD4Q9NZQ9 345 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 ZNF536O15090 1300 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 FAM86B1E9PN63 330 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 FAM86B2P0C5J1 330 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 HIRAP54198 1017 aaPredicted RBP19.2■□□□□ 0.66
LTBR-207ENST00000539925 PDE4DQ08499 809 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 FOXR2Q6PJQ5 311 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 LRRC8AQ8IWT6 810 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 NELFBQ8WX92 580 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 P2RX7Q99572 595 aaKnown RBP19.2■□□□□ 0.66
LTBR-207ENST00000539925 SCAF8Q9UPN6 1271 aaKnown RBP19.2■□□□□ 0.66
LTBR-207ENST00000539925 CTNND2Q9UQB3 1225 aa19.2■□□□□ 0.66
LTBR-207ENST00000539925 PPP1R12BO60237 982 aaPredicted RBP19.19■□□□□ 0.66
LTBR-207ENST00000539925 BCRP11274 1271 aa19.19■□□□□ 0.66
LTBR-207ENST00000539925 RPA1P27694 616 aa19.19■□□□□ 0.66
LTBR-207ENST00000539925 CEP55Q53EZ4 464 aa19.19■□□□□ 0.66
LTBR-207ENST00000539925 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.19■□□□□ 0.66
LTBR-207ENST00000539925 VSTM4Q8IW00 320 aa19.19■□□□□ 0.66
LTBR-207ENST00000539925 TRMT44Q8IYL2 757 aaKnown RBP19.19■□□□□ 0.66
LTBR-207ENST00000539925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.19■□□□□ 0.66
LTBR-207ENST00000539925 KIAA1524Q8TCG1 905 aa19.19■□□□□ 0.66
LTBR-207ENST00000539925 ZC3H15Q8WU90 426 aaKnown RBP19.19■□□□□ 0.66
LTBR-207ENST00000539925 WDR11Q9BZH6 1224 aa19.19■□□□□ 0.66
LTBR-207ENST00000539925 IGLV3-22A0A075B6J6 115 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 MSH4O15457 936 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 DDNO94850 711 aaPredicted RBP19.18■□□□□ 0.66
LTBR-207ENST00000539925 PRCPP42785 496 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 MCM6Q14566 821 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 TKFCQ3LXA3 575 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 TMC6Q7Z403 805 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 FILIP1Q7Z7B0 1213 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 L3MBTL3Q96JM7 780 aaPredicted RBP19.18■□□□□ 0.66
LTBR-207ENST00000539925 POLR3CQ9BUI4 534 aaPredicted RBP19.18■□□□□ 0.66
LTBR-207ENST00000539925 KCNF1Q9H3M0 494 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 NRBP1Q9UHY1 535 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 ZHX2Q9Y6X8 837 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 RPTORQ8N122 1335 aa19.18■□□□□ 0.66
LTBR-207ENST00000539925 LRRC10BA6NIK2 292 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 SFPQP23246 707 aaKnown RBP eCLIP19.17■□□□□ 0.66
LTBR-207ENST00000539925 SPIRE1Q08AE8 756 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 SH3D19Q5HYK7 790 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 XRRA1Q6P2D8 792 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 USP50Q70EL3 339 aaPredicted RBP19.17■□□□□ 0.66
LTBR-207ENST00000539925 CCDC112Q8NEF3 446 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 ZKSCAN4Q969J2 545 aaPredicted RBP19.17■□□□□ 0.66
LTBR-207ENST00000539925 AGBL1Q96MI9 1066 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 ZNF830Q96NB3 372 aaPredicted RBP19.17■□□□□ 0.66
LTBR-207ENST00000539925 MED15Q96RN5 788 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 THAP9Q9H5L6 903 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 A0A1B0GTH6 734 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 VWA5AO00534 786 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 ATP2A1O14983 1001 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 KIF20AO95235 890 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 NF2P35240 595 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 MAP3K9P80192 1104 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 COG2Q14746 738 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 CCDC144BQ3MJ40 725 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 SAMD1Q6SPF0 538 aaPredicted RBP19.17■□□□□ 0.66
LTBR-207ENST00000539925 FAM114A1Q8IWE2 563 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 SMYD4Q8IYR2 804 aaPredicted RBP19.17■□□□□ 0.66
LTBR-207ENST00000539925 LRRC15Q8TF66 581 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 CLEC4DQ8WXI8 215 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 SLC5A5Q92911 643 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 RIT2Q99578 217 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 TUFT1Q9NNX1 390 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 SAMSN1Q9NSI8 373 aaKnown RBP19.17■□□□□ 0.66
LTBR-207ENST00000539925 SPTLC3Q9NUV7 552 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 HOXC10Q9NYD6 342 aa19.17■□□□□ 0.66
LTBR-207ENST00000539925 DNM3Q9UQ16 869 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms