RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 MMP3P08254 477 aa17.48■□□□□ 0.39
USB1-203ENST00000539737 POU3F3P20264 500 aaPredicted RBP17.48■□□□□ 0.39
USB1-203ENST00000539737 ARHGAP1Q07960 439 aa17.48■□□□□ 0.39
USB1-203ENST00000539737 ZNF543Q08ER8 600 aa17.48■□□□□ 0.39
USB1-203ENST00000539737 HIC1Q14526 733 aa17.48■□□□□ 0.39
USB1-203ENST00000539737 SCFD2Q8WU76 684 aa17.48■□□□□ 0.39
USB1-203ENST00000539737 RUFY2Q8WXA3 655 aa17.48■□□□□ 0.39
USB1-203ENST00000539737 ZFP91Q96JP5 570 aaPredicted RBP17.48■□□□□ 0.39
USB1-203ENST00000539737 ALG1Q9BT22 464 aa17.48■□□□□ 0.39
USB1-203ENST00000539737 PITPNM1O00562 1244 aa17.47■□□□□ 0.39
USB1-203ENST00000539737 FGRP09769 529 aa17.47■□□□□ 0.39
USB1-203ENST00000539737 ZNF286BP0CG31 522 aa17.47■□□□□ 0.39
USB1-203ENST00000539737 ALX1Q15699 326 aa17.47■□□□□ 0.39
USB1-203ENST00000539737 BMP2KLQ5H9B9 411 aa17.47■□□□□ 0.39
USB1-203ENST00000539737 HLA-CQ95604 372 aa17.47■□□□□ 0.39
USB1-203ENST00000539737 SEZ6LQ9BYH1 1024 aa17.47■□□□□ 0.39
USB1-203ENST00000539737 OSBPL7Q9BZF2 842 aa17.47■□□□□ 0.39
USB1-203ENST00000539737 MUC6Q6W4X9 2439 aa17.46■□□□□ 0.39
USB1-203ENST00000539737 HSPD1P10809 573 aaKnown RBP17.46■□□□□ 0.39
USB1-203ENST00000539737 RFC2P35250 354 aa17.46■□□□□ 0.39
USB1-203ENST00000539737 MBTPS1Q14703 1052 aa17.46■□□□□ 0.39
USB1-203ENST00000539737 CCDC62Q6P9F0 684 aa17.46■□□□□ 0.39
USB1-203ENST00000539737 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.46■□□□□ 0.39
USB1-203ENST00000539737 LRRC8DQ7L1W4 858 aa17.46■□□□□ 0.39
USB1-203ENST00000539737 C1QTNF1Q9BXJ1 281 aa17.46■□□□□ 0.39
USB1-203ENST00000539737 SUGCTQ9HAC7 445 aa17.46■□□□□ 0.39
USB1-203ENST00000539737 HDAC6Q9UBN7 1215 aa17.46■□□□□ 0.39
USB1-203ENST00000539737 KCNJ6P48051 423 aa17.45■□□□□ 0.38
USB1-203ENST00000539737 BFSP2Q13515 415 aa17.45■□□□□ 0.38
USB1-203ENST00000539737 AAK1Q2M2I8 961 aa17.45■□□□□ 0.38
USB1-203ENST00000539737 PHOSPHO2Q8TCD6 241 aa17.45■□□□□ 0.38
USB1-203ENST00000539737 SYTL5Q8TDW5 730 aaPredicted RBP17.45■□□□□ 0.38
USB1-203ENST00000539737 ZBED2Q9BTP6 218 aa17.45■□□□□ 0.38
USB1-203ENST00000539737 KIAA1217Q5T5P2 1943 aa17.45■□□□□ 0.38
USB1-203ENST00000539737 CKBP12277 381 aa17.44■□□□□ 0.38
USB1-203ENST00000539737 SELPP16109 830 aa17.44■□□□□ 0.38
USB1-203ENST00000539737 EIF2AK2P19525 551 aaKnown RBP17.44■□□□□ 0.38
USB1-203ENST00000539737 CHMLP26374 656 aa17.44■□□□□ 0.38
USB1-203ENST00000539737 CDC37Q16543 378 aaPredicted RBP17.44■□□□□ 0.38
USB1-203ENST00000539737 TRAF7Q6Q0C0 670 aa17.44■□□□□ 0.38
USB1-203ENST00000539737 C17orf80Q9BSJ5 609 aa17.44■□□□□ 0.38
USB1-203ENST00000539737 MYH7BA7E2Y1 1941 aa17.44■□□□□ 0.38
USB1-203ENST00000539737 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
USB1-203ENST00000539737 MYO7AQ13402 2215 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 LINC01553A4QN01 128 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 KIF28PB7ZC32 967 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 NKRFO15226 690 aaKnown RBP eCLIP17.43■□□□□ 0.38
USB1-203ENST00000539737 SNHG28P0DPA3 235 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 IL9P15248 144 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 HOXD11P31277 338 aaPredicted RBP17.43■□□□□ 0.38
USB1-203ENST00000539737 BRDTQ58F21 947 aaPredicted RBP17.43■□□□□ 0.38
USB1-203ENST00000539737 TMEM31Q5JXX7 168 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 ZNF618Q5T7W0 954 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 SKAP1Q86WV1 359 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 DSCC1Q9BVC3 393 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 VAT1LQ9HCJ6 419 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 COG5Q9UP83 839 aa17.43■□□□□ 0.38
USB1-203ENST00000539737 SIP14410 1827 aa17.42■□□□□ 0.38
USB1-203ENST00000539737 GH1P01241 217 aa17.42■□□□□ 0.38
USB1-203ENST00000539737 KCNA5P22460 613 aa17.42■□□□□ 0.38
USB1-203ENST00000539737 PSEN2P49810 448 aa17.42■□□□□ 0.38
USB1-203ENST00000539737 TRIM71Q2Q1W2 868 aaKnown RBP17.42■□□□□ 0.38
USB1-203ENST00000539737 DNERQ8NFT8 737 aa17.42■□□□□ 0.38
USB1-203ENST00000539737 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
USB1-203ENST00000539737 GPKOWQ92917 476 aaPredicted RBP eCLIP17.42■□□□□ 0.38
USB1-203ENST00000539737 RNF41Q9H4P4 317 aaPredicted RBP17.42■□□□□ 0.38
USB1-203ENST00000539737 BCAS3Q9H6U6 928 aa17.42■□□□□ 0.38
USB1-203ENST00000539737 TCP11L1Q9NUJ3 509 aa17.42■□□□□ 0.38
USB1-203ENST00000539737 GTF2IRD1Q9UHL9 959 aa17.42■□□□□ 0.38
USB1-203ENST00000539737 WDR19Q8NEZ3 1342 aa17.42■□□□□ 0.38
USB1-203ENST00000539737 MYH6P13533 1939 aa17.41■□□□□ 0.38
USB1-203ENST00000539737 BAIAP3O94812 1187 aa17.41■□□□□ 0.38
USB1-203ENST00000539737 GJB5O95377 273 aa17.41■□□□□ 0.38
USB1-203ENST00000539737 PCP11498 1178 aaKnown RBP17.41■□□□□ 0.38
USB1-203ENST00000539737 PTPN11Q06124 597 aaPredicted RBP17.41■□□□□ 0.38
USB1-203ENST00000539737 MFSD10Q14728 455 aa17.41■□□□□ 0.38
USB1-203ENST00000539737 QRICH1Q2TAL8 776 aa17.41■□□□□ 0.38
USB1-203ENST00000539737 CNKSR3Q6P9H4 555 aa17.41■□□□□ 0.38
USB1-203ENST00000539737 ADGRF4Q8IZF3 695 aa17.41■□□□□ 0.38
USB1-203ENST00000539737 ANKS1AQ92625 1134 aa17.41■□□□□ 0.38
USB1-203ENST00000539737 UBE2ZQ9H832 354 aaPredicted RBP17.41■□□□□ 0.38
USB1-203ENST00000539737 CTNNA3Q9UI47 895 aa17.41■□□□□ 0.38
USB1-203ENST00000539737 C5orf42Q9H799 3197 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 OPLAHO14841 1288 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 SGSM2O43147 1006 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 KPNA6O60684 536 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 CXCL10P02778 98 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 KIAA0753Q2KHM9 967 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 CASC1Q6TDU7 716 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 MFSD6Q6ZSS7 791 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 IL31RAQ8NI17 732 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.4■□□□□ 0.38
USB1-203ENST00000539737 CAGE1Q8TC20 777 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 RMDN3Q96TC7 470 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
USB1-203ENST00000539737 TELO2Q9Y4R8 837 aa17.4■□□□□ 0.38
USB1-203ENST00000539737 MICAL3Q7RTP6 2002 aa17.39■□□□□ 0.37
USB1-203ENST00000539737 LOC102724159A0A0B4J2E5 919 aa17.39■□□□□ 0.37
USB1-203ENST00000539737 H3BQ06 376 aaPredicted RBP17.39■□□□□ 0.37
USB1-203ENST00000539737 DHX16O60231 1041 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms