RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 ITGA7Q13683 1181 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 USP17L6PQ6QN14 398 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 VSIG10LQ86VR7 867 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 SMARCC2Q8TAQ2 1214 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 BADQ92934 168 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 TMEM39AQ9NV64 488 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 POLR3EQ9NVU0 708 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 A6NJR5 290 aa18.06■□□□□ 0.48
CIT-210ENST00000539413 MEIS2O14770 477 aa18.06■□□□□ 0.48
CIT-210ENST00000539413 KIAA0355O15063 1070 aa18.06■□□□□ 0.48
CIT-210ENST00000539413 RGS20O76081 388 aa18.06■□□□□ 0.48
CIT-210ENST00000539413 PURAQ00577 322 aaKnown RBP18.06■□□□□ 0.48
CIT-210ENST00000539413 ARHGAP1Q07960 439 aa18.06■□□□□ 0.48
CIT-210ENST00000539413 HEATR3Q7Z4Q2 680 aa18.06■□□□□ 0.48
CIT-210ENST00000539413 FAM126BQ8IXS8 530 aa18.06■□□□□ 0.48
CIT-210ENST00000539413 SLC43A3Q8NBI5 491 aa18.06■□□□□ 0.48
CIT-210ENST00000539413 GPKOWQ92917 476 aaPredicted RBP eCLIP18.06■□□□□ 0.48
CIT-210ENST00000539413 CUL5Q93034 780 aa18.06■□□□□ 0.48
CIT-210ENST00000539413 DDX41Q9UJV9 622 aaKnown RBP18.06■□□□□ 0.48
CIT-210ENST00000539413 MRVI1Q9Y6F6 885 aa18.06■□□□□ 0.48
CIT-210ENST00000539413 FRMPD4Q14CM0 1322 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 PIK3CDO00329 1044 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 SLC34A2O95436 690 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 GH1P01241 217 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 CCND2P30279 289 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 METAP2P50579 478 aaKnown RBP eCLIP18.05■□□□□ 0.48
CIT-210ENST00000539413 RCAN1P53805 252 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 TDHQ8IZJ6 230 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 FBXL16Q8N461 479 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 AGXT2Q9BYV1 514 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 TBX21Q9UL17 535 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 KIAA1217Q5T5P2 1943 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 CEP290O15078 2479 aa18.05■□□□□ 0.48
CIT-210ENST00000539413 RAG1P15918 1043 aa18.04■□□□□ 0.48
CIT-210ENST00000539413 ADD1P35611 737 aaKnown RBP18.04■□□□□ 0.48
CIT-210ENST00000539413 MRPS9P82933 396 aaKnown RBP18.04■□□□□ 0.48
CIT-210ENST00000539413 BRDTQ58F21 947 aaPredicted RBP18.04■□□□□ 0.48
CIT-210ENST00000539413 WWC2Q6AWC2 1192 aa18.04■□□□□ 0.48
CIT-210ENST00000539413 RUFY3Q7L099 469 aa18.04■□□□□ 0.48
CIT-210ENST00000539413 AFG1LQ8WV93 481 aa18.04■□□□□ 0.48
CIT-210ENST00000539413 MTG1Q9BT17 334 aaPredicted RBP18.04■□□□□ 0.48
CIT-210ENST00000539413 PSTPIP2Q9H939 334 aa18.04■□□□□ 0.48
CIT-210ENST00000539413 ZSWIM6Q9HCJ5 1215 aa18.04■□□□□ 0.48
CIT-210ENST00000539413 V9GY48 417 aaPredicted RBP18.04■□□□□ 0.48
CIT-210ENST00000539413 SOX1O00570 391 aaPredicted RBP18.03■□□□□ 0.48
CIT-210ENST00000539413 TLR3O15455 904 aaKnown RBP18.03■□□□□ 0.48
CIT-210ENST00000539413 CD4P01730 458 aa18.03■□□□□ 0.48
CIT-210ENST00000539413 MMP3P08254 477 aa18.03■□□□□ 0.48
CIT-210ENST00000539413 UBE2SQ16763 222 aa18.03■□□□□ 0.48
CIT-210ENST00000539413 TYW1BQ6NUM6 668 aa18.03■□□□□ 0.48
CIT-210ENST00000539413 RANBP2P49792 3224 aaKnown RBP18.03■□□□□ 0.48
CIT-210ENST00000539413 NID2Q14112 1375 aa18.03■□□□□ 0.48
CIT-210ENST00000539413 SORBS3O60504 671 aa18.02■□□□□ 0.48
CIT-210ENST00000539413 KPNA6O60684 536 aa18.02■□□□□ 0.48
CIT-210ENST00000539413 KCNV1Q6PIU1 500 aa18.02■□□□□ 0.48
CIT-210ENST00000539413 DHX37Q8IY37 1157 aaKnown RBP18.02■□□□□ 0.48
CIT-210ENST00000539413 PPP1R13LQ8WUF5 828 aa18.02■□□□□ 0.48
CIT-210ENST00000539413 UPF3BQ9BZI7 483 aaKnown RBP18.02■□□□□ 0.48
CIT-210ENST00000539413 TRPV6Q9H1D0 765 aa18.02■□□□□ 0.48
CIT-210ENST00000539413 RTEL1Q9NZ71 1219 aa18.02■□□□□ 0.48
CIT-210ENST00000539413 CYP46A1Q9Y6A2 500 aa18.02■□□□□ 0.48
CIT-210ENST00000539413 CCDC196A0A1B0GTZ2 297 aa18.01■□□□□ 0.47
CIT-210ENST00000539413 B4GALT4O60513 344 aa18.01■□□□□ 0.47
CIT-210ENST00000539413 TIMP1P01033 207 aa18.01■□□□□ 0.47
CIT-210ENST00000539413 NAPAP54920 295 aa18.01■□□□□ 0.47
CIT-210ENST00000539413 SP2Q02086 613 aa18.01■□□□□ 0.47
CIT-210ENST00000539413 LAMC2Q13753 1193 aa18.01■□□□□ 0.47
CIT-210ENST00000539413 TOB2Q14106 344 aaPredicted RBP18.01■□□□□ 0.47
CIT-210ENST00000539413 EMID1Q96A84 441 aaPredicted RBP18.01■□□□□ 0.47
CIT-210ENST00000539413 SEZ6LQ9BYH1 1024 aa18.01■□□□□ 0.47
CIT-210ENST00000539413 TM6SF1Q9BZW5 370 aa18.01■□□□□ 0.47
CIT-210ENST00000539413 STXBP3O00186 592 aa18■□□□□ 0.47
CIT-210ENST00000539413 STAM2O75886 525 aa18■□□□□ 0.47
CIT-210ENST00000539413 GGPS1O95749 300 aa18■□□□□ 0.47
CIT-210ENST00000539413 UBA1P22314 1058 aaKnown RBP18■□□□□ 0.47
CIT-210ENST00000539413 PDIA3P30101 505 aaKnown RBP18■□□□□ 0.47
CIT-210ENST00000539413 EPHB4P54760 987 aa18■□□□□ 0.47
CIT-210ENST00000539413 EVCP57679 992 aa18■□□□□ 0.47
CIT-210ENST00000539413 NBPF20Q3BBV1 942 aa18■□□□□ 0.47
CIT-210ENST00000539413 GNPTABQ3T906 1256 aa18■□□□□ 0.47
CIT-210ENST00000539413 C9orf50Q5SZB4 431 aa18■□□□□ 0.47
CIT-210ENST00000539413 MYSM1Q5VVJ2 828 aa18■□□□□ 0.47
CIT-210ENST00000539413 PCNX4Q63HM2 1172 aa18■□□□□ 0.47
CIT-210ENST00000539413 LRCH3Q96II8 777 aa18■□□□□ 0.47
CIT-210ENST00000539413 INPP4AQ96PE3 977 aaPredicted RBP18■□□□□ 0.47
CIT-210ENST00000539413 PPP1R12CQ9BZL4 782 aa18■□□□□ 0.47
CIT-210ENST00000539413 ALDH8A1Q9H2A2 487 aaPredicted RBP18■□□□□ 0.47
CIT-210ENST00000539413 TGFB3P10600 412 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 ICAM3P32942 547 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 CHMP4BP1P59074 171 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 FPGSQ05932 587 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 SEMA3FQ13275 785 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 SHHQ15465 462 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 HSDL1Q3SXM5 330 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 LRIT3Q3SXY7 679 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 FAM47CQ5HY64 1035 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 CELF3Q5SZQ8 465 aaKnown RBP17.99■□□□□ 0.47
CIT-210ENST00000539413 PPP1R18Q6NYC8 613 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 PPTC7Q8NI37 304 aa17.99■□□□□ 0.47
CIT-210ENST00000539413 LARP6Q9BRS8 491 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms