RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 POMZP3Q6PJE2 187 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 CELF2-AS1Q8N7Q2 184 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 TMEM145Q8NBT3 493 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 RCBTB1Q8NDN9 531 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 C1orf159Q96HA4 380 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 TINF2Q9BSI4 451 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 ZNF408Q9H9D4 720 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 USP40Q9NVE5 1235 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 GJB6O95452 261 aa6.84□□□□□ -1.31
SRGAP1-203ENST00000537585 CAPNS1P04632 268 aa6.84□□□□□ -1.31
SRGAP1-203ENST00000537585 CYP2C8P10632 490 aa6.84□□□□□ -1.31
SRGAP1-203ENST00000537585 CEP68Q76N32 757 aa6.84□□□□□ -1.31
SRGAP1-203ENST00000537585 MIB1Q86YT6 1006 aa6.84□□□□□ -1.31
SRGAP1-203ENST00000537585 DCP2Q8IU60 420 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-203ENST00000537585 LINC00482Q8N8I6 264 aa6.84□□□□□ -1.31
SRGAP1-203ENST00000537585 PRKAG3Q9UGI9 489 aa6.84□□□□□ -1.31
SRGAP1-203ENST00000537585 DDAH1O94760 285 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 ZBTB7AO95365 584 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 SSBP05455 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 THBS2P35442 1172 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 GFRA1P56159 465 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 PLP2Q04941 152 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 EFEMP1Q12805 493 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 CD300LDQ6UXZ3 194 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 ETV3LQ6ZN32 361 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 MCF2L2Q86YR7 1114 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 PPIL6Q8IXY8 311 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 Q8N1Y9 231 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 HNRNPLLQ8WVV9 542 aaKnown RBP6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 DIO2Q92813 273 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 C11orf84Q9BUA3 381 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 LNPKQ9C0E8 428 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 WASF3Q9UPY6 502 aa6.83□□□□□ -1.32
SRGAP1-203ENST00000537585 SCG5P05408 212 aa6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 KCNJ6P48051 423 aa6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 SARSP49591 514 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 ITGA1P56199 1179 aa6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 RPL11P62913 178 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 CR1LQ2VPA4 569 aa6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 SLC10A6Q3KNW5 377 aa6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 MILR1Q7Z6M3 343 aa6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 CRACR2BQ8N4Y2 399 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 ADAMTS17Q8TE56 1095 aa6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 LRP2BPQ9P2M1 347 aa6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 RBPJLQ9UBG7 517 aa6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 PPARGC1AQ9UBK2 798 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 TIMM13Q9Y5L4 95 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-203ENST00000537585 MEFVO15553 781 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 NAT2P11245 290 aa6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 UBXN11Q5T124 520 aa6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 ZFYVE27Q5T4F4 411 aa6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 ARRDC4Q8NCT1 418 aa6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 ZSWIM3Q96MP5 696 aa6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 AP5M1Q9H0R1 490 aa6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 ST7Q9NRC1 585 aa6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 NTMQ9P121 344 aa6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 PCDHA2Q9Y5H9 948 aa6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 X6R8D5 127 aa6.81□□□□□ -1.32
SRGAP1-203ENST00000537585 MSCO60682 206 aa6.8□□□□□ -1.32
SRGAP1-203ENST00000537585 TCF3P15923 654 aa6.8□□□□□ -1.32
SRGAP1-203ENST00000537585 SLC6A11P48066 632 aa6.8□□□□□ -1.32
SRGAP1-203ENST00000537585 GJA9P57773 515 aa6.8□□□□□ -1.32
SRGAP1-203ENST00000537585 PRR31Q5SQ13 230 aa6.8□□□□□ -1.32
SRGAP1-203ENST00000537585 FAM126BQ8IXS8 530 aa6.8□□□□□ -1.32
SRGAP1-203ENST00000537585 SEC14L1Q92503 715 aa6.8□□□□□ -1.32
SRGAP1-203ENST00000537585 TRMT2BQ96GJ1 504 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-203ENST00000537585 CDIP1Q9H305 208 aa6.8□□□□□ -1.32
SRGAP1-203ENST00000537585 HOXC12P31275 282 aa6.79□□□□□ -1.32
SRGAP1-203ENST00000537585 ADAM9Q13443 819 aa6.79□□□□□ -1.32
SRGAP1-203ENST00000537585 TNNI3KQ59H18 835 aa6.79□□□□□ -1.32
SRGAP1-203ENST00000537585 SLC35F1Q5T1Q4 408 aa6.79□□□□□ -1.32
SRGAP1-203ENST00000537585 E4F1Q66K89 784 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-203ENST00000537585 HHIPL2Q6UWX4 724 aa6.79□□□□□ -1.32
SRGAP1-203ENST00000537585 RIOX2Q8IUF8 465 aa6.79□□□□□ -1.32
SRGAP1-203ENST00000537585 TMEM169Q96HH4 297 aa6.79□□□□□ -1.32
SRGAP1-203ENST00000537585 A0A1W2PQU0 124 aa6.78□□□□□ -1.32
SRGAP1-203ENST00000537585 PPP2R2AP63151 447 aa6.78□□□□□ -1.32
SRGAP1-203ENST00000537585 KCNAB2Q13303 367 aa6.78□□□□□ -1.32
SRGAP1-203ENST00000537585 TESK1Q15569 626 aa6.78□□□□□ -1.32
SRGAP1-203ENST00000537585 RGL3Q3MIN7 710 aa6.78□□□□□ -1.32
SRGAP1-203ENST00000537585 ACBD5Q5T8D3 534 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-203ENST00000537585 MCTP2Q6DN12 878 aa6.78□□□□□ -1.32
SRGAP1-203ENST00000537585 KYQ8NBH2 561 aa6.78□□□□□ -1.32
SRGAP1-203ENST00000537585 TCRBV5S2A0A599 114 aa6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 DDX3XO00571 662 aaKnown RBP eCLIP6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 ADRB1P08588 477 aa6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 RPL13P26373 211 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 DNAJA1P31689 397 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 LTBRP36941 435 aa6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 FXNQ16595 210 aa6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 PHF19Q5T6S3 580 aa6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 MROH9Q5TGP6 573 aa6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 RBM12BQ8IXT5 1001 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 RBM15Q96T37 977 aaKnown RBP eCLIP6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 IER2Q9BTL4 223 aa6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 CLDND1Q9NY35 253 aa6.77□□□□□ -1.33
SRGAP1-203ENST00000537585 SMARCA5O60264 1052 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-203ENST00000537585 DLX3O60479 287 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms