RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 NAP1L1P55209 391 aaKnown RBP15.48■□□□□ 0.07
LIG1-203ENST00000536218 CCNI2Q6ZMN8 369 aaPredicted RBP15.48■□□□□ 0.07
LIG1-203ENST00000536218 SH3GL2Q99962 352 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 ZNF287Q9HBT7 754 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 HAUS2Q9NVX0 235 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 GOLGA6L7A0A1B0GV03 622 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 ADCY2Q08462 1091 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 SNX1Q13596 522 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 CYB5D1Q6P9G0 228 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 CCDC121Q6ZUS5 278 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 BLIDQ8IZY5 108 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 TNFRSF25Q93038 417 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 MAN1B1Q9UKM7 699 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 FAM205AQ6ZU69 1335 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 OPA1O60313 960 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 NPR1P16066 1061 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 STX17P56962 302 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 GRM4Q14833 912 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 ARMC3Q5W041 872 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 USP40Q9NVE5 1235 aa15.47■□□□□ 0.07
LIG1-203ENST00000536218 RAD21O60216 631 aa15.46■□□□□ 0.07
LIG1-203ENST00000536218 MDM2Q00987 491 aaPredicted RBP15.46■□□□□ 0.07
LIG1-203ENST00000536218 C16orf86Q6ZW13 317 aa15.46■□□□□ 0.07
LIG1-203ENST00000536218 SPATS2Q86XZ4 545 aaKnown RBP15.46■□□□□ 0.07
LIG1-203ENST00000536218 RSRC1Q96IZ7 334 aaKnown RBP15.46■□□□□ 0.07
LIG1-203ENST00000536218 COA1Q9GZY4 146 aa15.46■□□□□ 0.07
LIG1-203ENST00000536218 TPX2Q9ULW0 747 aaKnown RBP15.46■□□□□ 0.07
LIG1-203ENST00000536218 KLRG2A4D1S0 409 aaPredicted RBP15.46■□□□□ 0.07
LIG1-203ENST00000536218 MYO1BO43795 1136 aa15.46■□□□□ 0.07
LIG1-203ENST00000536218 MATR3P43243 847 aaKnown RBP eCLIP15.46■□□□□ 0.071e-9■■■■■ 38.3
LIG1-203ENST00000536218 CACNB3P54284 484 aa15.46■□□□□ 0.07
LIG1-203ENST00000536218 ZNF473Q8WTR7 871 aaKnown RBP15.46■□□□□ 0.07
LIG1-203ENST00000536218 DDX4Q9NQI0 724 aaKnown RBP15.46■□□□□ 0.07
LIG1-203ENST00000536218 TFR2Q9UP52 801 aa15.46■□□□□ 0.07
LIG1-203ENST00000536218 FRMPD2Q68DX3 1309 aaPredicted RBP15.46■□□□□ 0.06
LIG1-203ENST00000536218 CCDC194A0A1B0GVG4 234 aa15.46■□□□□ 0.06
LIG1-203ENST00000536218 CDC25CP30307 473 aa15.46■□□□□ 0.06
LIG1-203ENST00000536218 RBM5P52756 815 aaKnown RBP eCLIP15.46■□□□□ 0.06
LIG1-203ENST00000536218 HDLBPQ00341 1268 aaKnown RBP15.46■□□□□ 0.06
LIG1-203ENST00000536218 AMPD2Q01433 879 aa15.46■□□□□ 0.06
LIG1-203ENST00000536218 KCNB1Q14721 858 aa15.46■□□□□ 0.06
LIG1-203ENST00000536218 NR1I3Q14994 352 aa15.46■□□□□ 0.06
LIG1-203ENST00000536218 KIAA0825Q8IV33 1275 aa15.46■□□□□ 0.06
LIG1-203ENST00000536218 LRRC47Q8N1G4 583 aaKnown RBP15.46■□□□□ 0.06
LIG1-203ENST00000536218 ZNF579Q8NAF0 562 aaKnown RBP15.46■□□□□ 0.06
LIG1-203ENST00000536218 NAA15Q9BXJ9 866 aaKnown RBP15.46■□□□□ 0.06
LIG1-203ENST00000536218 SAR1BQ9Y6B6 198 aa15.46■□□□□ 0.06
LIG1-203ENST00000536218 ACTN4O43707 911 aaKnown RBP15.45■□□□□ 0.06
LIG1-203ENST00000536218 ATP1A1P05023 1023 aaKnown RBP15.45■□□□□ 0.06
LIG1-203ENST00000536218 LSP1P33241 339 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 C2orf54Q08AI8 447 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 FAM228AQ86W67 206 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 AKT1S1Q96B36 256 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 PCDHAC2Q9Y5I4 1007 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 PARP1P09874 1014 aaKnown RBP15.45■□□□□ 0.06
LIG1-203ENST00000536218 ALDH1B1P30837 517 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 GNAQP50148 359 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 APBA1Q02410 837 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 INF2Q27J81 1249 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 ACCSLQ4AC99 568 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 TTMPQ5BVD1 217 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 MICAL1Q8TDZ2 1067 aa15.45■□□□□ 0.06
LIG1-203ENST00000536218 USP17L5A8MUK1 530 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 MFAP3LO75121 409 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 FXR1P51114 621 aaKnown RBP eCLIP15.44■□□□□ 0.06
LIG1-203ENST00000536218 TCP10Q12799 353 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 RBBP5Q15291 538 aaKnown RBP15.44■□□□□ 0.06
LIG1-203ENST00000536218 SMYD4Q8IYR2 804 aaPredicted RBP15.44■□□□□ 0.06
LIG1-203ENST00000536218 NEDD1Q8NHV4 660 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 CCDC26Q8TAB7 109 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 TATDN2Q93075 761 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 FAM184BQ9ULE4 1060 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 BRWD3Q6RI45 1802 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 E7EVH7 732 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 OPLAHO14841 1288 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 ZNF185O15231 689 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 HSF2BPO75031 334 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 COBLO75128 1261 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 CALML3P27482 149 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 CHRNA5P30532 468 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 CCDC70Q6NSX1 233 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 C2CD5Q86YS7 1000 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 FUKQ8N0W3 1084 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 SAAL1Q96ER3 474 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 FAM163AQ96GL9 167 aaPredicted RBP15.44■□□□□ 0.06
LIG1-203ENST00000536218 RNPC3Q96LT9 517 aaKnown RBP15.44■□□□□ 0.06
LIG1-203ENST00000536218 PLIN2Q99541 437 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 BLZF1Q9H2G9 400 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 PCDHA4Q9UN74 947 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 GAKO14976 1311 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 ZNF18P17022 549 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 NAPAP54920 295 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 NNTQ13423 1086 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 CCDC178Q5BJE1 867 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
LIG1-203ENST00000536218 RASSF8Q8NHQ8 419 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 LMBR1Q8WVP7 490 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 ANKS1AQ92625 1134 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 FERMT2Q96AC1 680 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 CCT8L2Q96SF2 557 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms