RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 CCDC62Q6P9F0 684 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CPLX2Q6PUV4 134 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SEPT14Q6ZU15 432 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 KLHDC9Q8NEP7 349 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 COPS5Q92905 334 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 MPHOSPH6Q99547 160 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 WDR11Q9BZH6 1224 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SH3GLB2Q9NR46 395 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 GJB4Q9NTQ9 266 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 PCDHA6Q9UN73 950 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 PCDHA8Q9Y5H6 950 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 EIF3JO75822 258 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CDKL5O76039 1030 aa12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CCND2P30279 289 aa12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 GJA9P57773 515 aa12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 NKX3-2P78367 333 aa12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 PCNX4Q63HM2 1172 aa12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CCSAPQ6IQ19 270 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 TLK2Q86UE8 772 aa12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CCDC83Q8IWF9 413 aa12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 RASGRP4Q8TDF6 673 aa12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SCFD2Q8WU76 684 aa12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ANO3Q9BYT9 981 aa12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ORC3Q9UBD5 711 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SPDYE3A6NKU9 549 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ST18O60284 1047 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 TXNP10599 105 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CST5P28325 142 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 BEX3Q00994 111 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SEMA3FQ13275 785 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 LY6KQ17RY6 165 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 TEX2Q8IWB9 1127 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ARRDC4Q8NCT1 418 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CCDC12Q8WUD4 166 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 INPP4AQ96PE3 977 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 C11orf49Q9H6J7 331 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 C6orf50Q9HD87 102 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 RTEL1Q9NZ71 1219 aa12.97□□□□□ -0.33
TNFRSF1A-208ENST00000536194 TNRC18O15417 2968 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 M0R2N6 131 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 DYNC1LI2O43237 492 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 C6orf222P0C671 652 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 NLRP5P59047 1200 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SP2Q02086 613 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 MLLT1Q03111 559 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 AP3B2Q13367 1082 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 TTLL4Q14679 1199 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 KCNA10Q16322 511 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 NECAB2Q7Z6G3 386 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 REXO1Q8N1G1 1221 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CCDC148Q8NFR7 591 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CRYGNQ8WXF5 182 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 TMX3Q96JJ7 454 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ALG1Q9BT22 464 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 PHF20Q9BVI0 1012 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 GLT8D2Q9H1C3 349 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SH2B1Q9NRF2 756 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 DDX41Q9UJV9 622 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 KCNJ14Q9UNX9 436 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 PHF24Q9UPV7 400 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 Q9Y3F1 56 aa12.96□□□□□ -0.33
TNFRSF1A-208ENST00000536194 KBTBD13C9JR72 458 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 NKRFO15226 690 aaKnown RBP eCLIP12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 EDIL3O43854 480 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 FOSP01100 380 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 ITGB5P18084 799 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 GNA11P29992 359 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 SREBF1P36956 1147 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 ARHGAP1Q07960 439 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 FSCN1Q16658 493 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 XRRA1Q6P2D8 792 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 RNF180Q86T96 592 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 DAGLBQ8NCG7 672 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 SENP6Q9GZR1 1112 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 BCAS3Q9H6U6 928 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 PCDHA4Q9UN74 947 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 UBIAD1Q9Y5Z9 338 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 MRVI1Q9Y6F6 885 aa12.95□□□□□ -0.34
TNFRSF1A-208ENST00000536194 A0A1W2PQ45 241 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 A0A1W2PQY0 241 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 SPATA31C2B4DYI2 1134 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 STAM2O75886 525 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 ASGR1P07306 291 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 UBA1P22314 1058 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 ICAM3P32942 547 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 ACLYP53396 1101 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 ARHGAP4P98171 946 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 LRRC26Q2I0M4 334 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 GNASQ5JWF2 1037 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 FAM177A1Q8N128 213 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 CYP2W1Q8TAV3 490 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 OXER1Q8TDS5 423 aa12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 LLPHQ9BRT6 129 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1A-208ENST00000536194 TSEN34Q9BSV6 310 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms