RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 Q9Y3F1 56 aa16.62■□□□□ 0.25
MSRB3-206ENST00000535664 PLXNA1Q9UIW2 1896 aa16.62■□□□□ 0.25
MSRB3-206ENST00000535664 BTBD18B2RXH4 712 aa16.61■□□□□ 0.25
MSRB3-206ENST00000535664 NFIBO00712 420 aa16.61■□□□□ 0.25
MSRB3-206ENST00000535664 TAL1P17542 331 aaPredicted RBP16.61■□□□□ 0.25
MSRB3-206ENST00000535664 NAPAP54920 295 aa16.61■□□□□ 0.25
MSRB3-206ENST00000535664 LRRC41Q15345 812 aa16.61■□□□□ 0.25
MSRB3-206ENST00000535664 PCSK9Q8NBP7 692 aaKnown RBP16.61■□□□□ 0.25
MSRB3-206ENST00000535664 FGD4Q96M96 766 aa16.61■□□□□ 0.25
MSRB3-206ENST00000535664 SENP6Q9GZR1 1112 aaPredicted RBP16.61■□□□□ 0.25
MSRB3-206ENST00000535664 FOXP1Q9H334 677 aaPredicted RBP16.61■□□□□ 0.25
MSRB3-206ENST00000535664 PCDHA4Q9UN74 947 aa16.61■□□□□ 0.25
MSRB3-206ENST00000535664 PDE4DIPQ5VU43 2346 aa16.61■□□□□ 0.25
MSRB3-206ENST00000535664 MOXD2PA6NHM9 499 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 OPLAHO14841 1288 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 CALML3P27482 149 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 KRT2P35908 639 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 ALDH5A1P51649 535 aaPredicted RBP16.6■□□□□ 0.25
MSRB3-206ENST00000535664 NLRP5P59047 1200 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 RPS6P62753 249 aaKnown RBP16.6■□□□□ 0.25
MSRB3-206ENST00000535664 NR5A1Q13285 461 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 CCDC144BQ3MJ40 725 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 USH1GQ495M9 461 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 C1orf53Q5VUE5 145 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 MCTP1Q6DN14 999 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 GALNT17Q6IS24 598 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 FAM173BQ6P4H8 233 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 BRAPQ7Z569 592 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
MSRB3-206ENST00000535664 IWS1Q96ST2 819 aa16.6■□□□□ 0.25
MSRB3-206ENST00000535664 SMCO2A6NFE2 343 aa16.59■□□□□ 0.25
MSRB3-206ENST00000535664 H0YGN5 161 aa16.59■□□□□ 0.25
MSRB3-206ENST00000535664 BAG4O95429 457 aaKnown RBP16.59■□□□□ 0.25
MSRB3-206ENST00000535664 CST5P28325 142 aaPredicted RBP16.59■□□□□ 0.25
MSRB3-206ENST00000535664 NKX3-2P78367 333 aa16.59■□□□□ 0.25
MSRB3-206ENST00000535664 TNFAIP2Q03169 654 aa16.59■□□□□ 0.25
MSRB3-206ENST00000535664 SAFBQ15424 915 aaKnown RBP eCLIP16.59■□□□□ 0.25
MSRB3-206ENST00000535664 EARS2Q5JPH6 523 aaKnown RBP16.59■□□□□ 0.25
MSRB3-206ENST00000535664 GJC2Q5T442 439 aaPredicted RBP16.59■□□□□ 0.25
MSRB3-206ENST00000535664 NOSTRINQ8IVI9 506 aa16.59■□□□□ 0.25
MSRB3-206ENST00000535664 BLIDQ8IZY5 108 aa16.59■□□□□ 0.25
MSRB3-206ENST00000535664 NSUN6Q8TEA1 469 aaKnown RBP16.59■□□□□ 0.25
MSRB3-206ENST00000535664 SEZ6LQ9BYH1 1024 aa16.59■□□□□ 0.25
MSRB3-206ENST00000535664 PHF24Q9UPV7 400 aa16.59■□□□□ 0.25
MSRB3-206ENST00000535664 PCDHA1Q9Y5I3 950 aa16.59■□□□□ 0.25
MSRB3-206ENST00000535664 MKI67P46013 3256 aaKnown RBP16.58■□□□□ 0.24
MSRB3-206ENST00000535664 ZEB2O60315 1214 aa16.58■□□□□ 0.24
MSRB3-206ENST00000535664 MYCNP04198 464 aaPredicted RBP16.58■□□□□ 0.24
MSRB3-206ENST00000535664 GJA9P57773 515 aa16.58■□□□□ 0.24
MSRB3-206ENST00000535664 GHRHRQ02643 423 aa16.58■□□□□ 0.24
MSRB3-206ENST00000535664 PDE4DQ08499 809 aa16.58■□□□□ 0.24
MSRB3-206ENST00000535664 KATNBL1Q9H079 304 aa16.58■□□□□ 0.24
MSRB3-206ENST00000535664 AP5M1Q9H0R1 490 aa16.58■□□□□ 0.24
MSRB3-206ENST00000535664 UPF3AQ9H1J1 476 aaKnown RBP16.58■□□□□ 0.24
MSRB3-206ENST00000535664 C6orf50Q9HD87 102 aa16.58■□□□□ 0.24
MSRB3-206ENST00000535664 RIC8AQ9NPQ8 531 aa16.58■□□□□ 0.24
MSRB3-206ENST00000535664 FAM205CA6NFA0 338 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 NKRFO15226 690 aaKnown RBP eCLIP16.57■□□□□ 0.24
MSRB3-206ENST00000535664 ADAMTS4O75173 837 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 CLK2P49760 499 aaKnown RBP16.57■□□□□ 0.24
MSRB3-206ENST00000535664 ADCY7P51828 1080 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 DNM1Q05193 864 aaKnown RBP16.57■□□□□ 0.24
MSRB3-206ENST00000535664 MYSM1Q5VVJ2 828 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 ANO1Q5XXA6 986 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 SLC39A5Q6ZMH5 540 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 TEX2Q8IWB9 1127 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 KLHDC9Q8NEP7 349 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 BRMS1Q9HCU9 246 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 PCDHA6Q9UN73 950 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 PCDHA8Q9Y5H6 950 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 ATP6V1DQ9Y5K8 247 aa16.57■□□□□ 0.24
MSRB3-206ENST00000535664 SYNRGQ9UMZ2 1314 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 RBM47A0AV96 593 aaKnown RBP16.56■□□□□ 0.24
MSRB3-206ENST00000535664 CABYRO75952 493 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 PGK1P00558 417 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 EDNRBP24530 442 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 GNA11P29992 359 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 ADCYAP1R1P41586 468 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 HSD17B4P51659 736 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 FOXD4L6Q3SYB3 417 aaPredicted RBP16.56■□□□□ 0.24
MSRB3-206ENST00000535664 BRDTQ58F21 947 aaPredicted RBP16.56■□□□□ 0.24
MSRB3-206ENST00000535664 FOXD4L3Q6VB84 417 aaPredicted RBP16.56■□□□□ 0.24
MSRB3-206ENST00000535664 SLC30A10Q6XR72 485 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 C7orf61Q8IZ16 206 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 RASGRP4Q8TDF6 673 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 SCFD2Q8WU76 684 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 GLT1D1Q96MS3 346 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 PRKAG2Q9UGJ0 569 aa16.56■□□□□ 0.24
MSRB3-206ENST00000535664 SMCHD1A6NHR9 2005 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 ELP1O95163 1332 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 A0A1W2PPC1 479 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 C6orf222P0C671 652 aaPredicted RBP16.55■□□□□ 0.24
MSRB3-206ENST00000535664 TOB1P50616 345 aaPredicted RBP16.55■□□□□ 0.24
MSRB3-206ENST00000535664 ACLYP53396 1101 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 SNX17Q15036 470 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 STXBP2Q15833 593 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 DUSP28Q4G0W2 176 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 GNASQ5JWF2 1037 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 TAPT1Q6NXT6 567 aa16.55■□□□□ 0.24
MSRB3-206ENST00000535664 SYTL5Q8TDW5 730 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms