RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 SNAI1O95863 264 aaPredicted RBP17.74■□□□□ 0.43
CNN1-202ENST00000535659 F13A1P00488 732 aa17.74■□□□□ 0.43
CNN1-202ENST00000535659 MRPS9P82933 396 aaKnown RBP17.74■□□□□ 0.43
CNN1-202ENST00000535659 ARMCX2Q7L311 632 aa17.74■□□□□ 0.43
CNN1-202ENST00000535659 CTU1Q7Z7A3 348 aaKnown RBP17.74■□□□□ 0.43
CNN1-202ENST00000535659 NEK8Q86SG6 692 aa17.74■□□□□ 0.43
CNN1-202ENST00000535659 PXYLP1Q8TE99 480 aa17.74■□□□□ 0.43
CNN1-202ENST00000535659 RTEL1Q9NZ71 1219 aa17.74■□□□□ 0.43
CNN1-202ENST00000535659 PTPN22Q9Y2R2 807 aa17.74■□□□□ 0.43
CNN1-202ENST00000535659 SYNGAP1Q96PV0 1343 aa17.74■□□□□ 0.43
CNN1-202ENST00000535659 STAM2O75886 525 aa17.73■□□□□ 0.43
CNN1-202ENST00000535659 CIITAP33076 1130 aa17.73■□□□□ 0.43
CNN1-202ENST00000535659 ZNF76P36508 570 aa17.73■□□□□ 0.43
CNN1-202ENST00000535659 TRAPPC10P48553 1259 aa17.73■□□□□ 0.43
CNN1-202ENST00000535659 LETM2Q2VYF4 491 aa17.73■□□□□ 0.43
CNN1-202ENST00000535659 ZFP91Q96JP5 570 aaPredicted RBP17.73■□□□□ 0.43
CNN1-202ENST00000535659 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.73■□□□□ 0.43
CNN1-202ENST00000535659 NOL7Q9UMY1 257 aaKnown RBP17.73■□□□□ 0.43
CNN1-202ENST00000535659 CYP3A7-CYP3A51PA0A087WV96 503 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 ATP2B1P20020 1258 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 CYP3A7P24462 503 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 CYP2C19P33261 490 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 TOB1P50616 345 aaPredicted RBP17.72■□□□□ 0.43
CNN1-202ENST00000535659 RILPL1Q5EBL4 403 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 MFSD14CQ5VZR4 134 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 TRIB2Q92519 343 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 NAP1L4Q99733 375 aaKnown RBP17.72■□□□□ 0.43
CNN1-202ENST00000535659 ABHD16BQ9H3Z7 469 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 CHMP5Q9NZZ3 219 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 UBIAD1Q9Y5Z9 338 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 PTCH2Q9Y6C5 1203 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 CASP8AP2Q9UKL3 1982 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 ELNP15502 786 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 CEP55Q53EZ4 464 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 MYSM1Q5VVJ2 828 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 PPP4R3AQ6IN85 833 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 EEPD1Q7L9B9 569 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 MXRA8Q9BRK3 442 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 PLXNA1Q9UIW2 1896 aa17.72■□□□□ 0.43
CNN1-202ENST00000535659 FAM86B1E9PN63 330 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 MEIS1O00470 390 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 CCNT1O60563 726 aaKnown RBP17.71■□□□□ 0.43
CNN1-202ENST00000535659 FAM86B2P0C5J1 330 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 ITGB5P18084 799 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 ACVR2BQ13705 512 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 FAM173BQ6P4H8 233 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 MOXD1Q6UVY6 613 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 SLAIN1Q8ND83 568 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 CYP2W1Q8TAV3 490 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 INPP4AQ96PE3 977 aaPredicted RBP17.71■□□□□ 0.43
CNN1-202ENST00000535659 JADE2Q9NQC1 790 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 CNPY2Q9Y2B0 182 aa17.71■□□□□ 0.43
CNN1-202ENST00000535659 MAFGO15525 162 aa17.7■□□□□ 0.42
CNN1-202ENST00000535659 RGS20O76081 388 aa17.7■□□□□ 0.42
CNN1-202ENST00000535659 GRK4P32298 578 aa17.7■□□□□ 0.42
CNN1-202ENST00000535659 PKN2Q16513 984 aaKnown RBP17.7■□□□□ 0.42
CNN1-202ENST00000535659 TTC38Q5R3I4 469 aa17.7■□□□□ 0.42
CNN1-202ENST00000535659 PRAMEF19Q5SWL8 479 aa17.7■□□□□ 0.42
CNN1-202ENST00000535659 NIPA1Q7RTP0 329 aa17.7■□□□□ 0.42
CNN1-202ENST00000535659 NLRX1Q86UT6 975 aa17.7■□□□□ 0.42
CNN1-202ENST00000535659 VTA1Q9NP79 307 aa17.7■□□□□ 0.42
CNN1-202ENST00000535659 HTTP42858 3142 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 IGLV3-22A0A075B6J6 115 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 CCDC85CA6NKD9 419 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 TDP2O95551 362 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 HMGCRP04035 888 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 GCFC2P16383 781 aaKnown RBP17.69■□□□□ 0.42
CNN1-202ENST00000535659 ZNF174Q15697 407 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 GNPTABQ3T906 1256 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 Q4G0T1 1027 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 TAPT1Q6NXT6 567 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 SEPT14Q6ZU15 432 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 PLA2G4DQ86XP0 818 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 GPRASP2Q96D09 838 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 MBOAT7Q96N66 472 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 WDR11Q9BZH6 1224 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 KATNBL1Q9H079 304 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 NRBP1Q9UHY1 535 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 ATP6V1DQ9Y5K8 247 aa17.69■□□□□ 0.42
CNN1-202ENST00000535659 SPATA31C2B4DYI2 1134 aa17.68■□□□□ 0.42
CNN1-202ENST00000535659 WNT7AO00755 349 aa17.68■□□□□ 0.42
CNN1-202ENST00000535659 ZNF865P0CJ78 1059 aaPredicted RBP17.68■□□□□ 0.42
CNN1-202ENST00000535659 RGS19P49795 217 aa17.68■□□□□ 0.42
CNN1-202ENST00000535659 CACNB2Q08289 660 aaPredicted RBP17.68■□□□□ 0.42
CNN1-202ENST00000535659 PRR16Q569H4 304 aa17.68■□□□□ 0.42
CNN1-202ENST00000535659 KCNV1Q6PIU1 500 aa17.68■□□□□ 0.42
CNN1-202ENST00000535659 FBXO16Q8IX29 292 aaPredicted RBP17.68■□□□□ 0.42
CNN1-202ENST00000535659 PDGFCQ9NRA1 345 aa17.68■□□□□ 0.42
CNN1-202ENST00000535659 DDX25Q9UHL0 483 aaKnown RBP17.68■□□□□ 0.42
CNN1-202ENST00000535659 PCDHB6Q9Y5E3 794 aa17.68■□□□□ 0.42
CNN1-202ENST00000535659 RBM47A0AV96 593 aaKnown RBP17.67■□□□□ 0.42
CNN1-202ENST00000535659 ARP10275 920 aa17.67■□□□□ 0.42
CNN1-202ENST00000535659 TGFB3P10600 412 aa17.67■□□□□ 0.42
CNN1-202ENST00000535659 ICAM3P32942 547 aa17.67■□□□□ 0.42
CNN1-202ENST00000535659 MCM7P33993 719 aa17.67■□□□□ 0.42
CNN1-202ENST00000535659 MLLT1Q03111 559 aaPredicted RBP17.67■□□□□ 0.42
CNN1-202ENST00000535659 TRIM32Q13049 653 aa17.67■□□□□ 0.42
CNN1-202ENST00000535659 ORC2Q13416 577 aaPredicted RBP17.67■□□□□ 0.42
CNN1-202ENST00000535659 MTMR1Q13613 665 aa17.67■□□□□ 0.42
CNN1-202ENST00000535659 NBR1Q14596 966 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms