RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 LSM14BQ9BX40 385 aaKnown RBP15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 SH2D4AQ9H788 454 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 PARP4Q9UKK3 1724 aaKnown RBP15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 RIMBP2O15034 1052 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 GNPATO15228 680 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 RASA1P20936 1047 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 KLRC1P26715 233 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 HLTFQ14527 1009 aaKnown RBP eCLIP15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 KCTD1Q719H9 257 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 FBXO33Q7Z6M2 555 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 KSR1Q8IVT5 923 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 NOC3LQ8WTT2 800 aaKnown RBP15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 PNMA5Q96PV4 448 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 RUFY1Q96T51 708 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 TLR10Q9BXR5 811 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 CAPS2Q9BXY5 557 aa15.4■□□□□ 0.06
LPCAT3-203ENST00000535479 ITGB4P16144 1822 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 SFI1A8K8P3 1242 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 HEXIM1O94992 359 aaKnown RBP15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 IVLP07476 585 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 NOP2P46087 812 aaKnown RBP15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 NONOQ15233 471 aaKnown RBP eCLIP15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 MAATS1Q7Z4T9 603 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 UHMK1Q8TAS1 419 aaKnown RBP15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 ACBD3Q9H3P7 528 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 PSD3Q9NYI0 1048 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 CACNA1SQ13698 1873 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 LMTK3Q96Q04 1460 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 M0R2N6 131 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 TLR2O60603 784 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 CACNB3P54284 484 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 CALCRLQ16602 461 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 MEA1Q16626 185 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 FAM169AQ9Y6X4 670 aa15.39■□□□□ 0.05
LPCAT3-203ENST00000535479 SMIM23A6NLE4 172 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 USP17L15C9J2P7 530 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 USP17L13C9JLJ4 530 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 USP17L11C9JVI0 530 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 USP17L18D6R9N7 530 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 USP17L22D6RA61 530 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 USP17L17D6RBQ6 530 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 USP17L19D6RCP7 530 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 USP17L20D6RJB6 530 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 BTDP43251 543 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 USP17L24Q0WX57 530 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 KCNMA1Q12791 1236 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 PARP10Q53GL7 1025 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 USP17L6PQ6QN14 398 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 NEK8Q86SG6 692 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 MED4Q9NPJ6 270 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 PPANQ9NQ55 473 aaKnown RBP15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 MPHOSPH10O00566 681 aaKnown RBP15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 ORC4O43929 436 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 PPFIA4O75335 1185 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 RNF187Q5TA31 235 aaPredicted RBP15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 KLHDC7AQ5VTJ3 777 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 ARL6IP4Q66PJ3 421 aaKnown RBP15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 SV2BQ7L1I2 683 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 RNPC3Q96LT9 517 aaKnown RBP15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 NLRP3Q96P20 1036 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 MYO1AQ9UBC5 1043 aa15.38■□□□□ 0.05
LPCAT3-203ENST00000535479 A0A087X0T9 212 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 USO1O60763 962 aaKnown RBP15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 FAM228BP0C875 321 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 CDK8P49336 464 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 GTF2A1P52655 376 aaPredicted RBP15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 GRM4Q14833 912 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 AENQ8WTP8 325 aaKnown RBP15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 ELMO3Q96BJ8 720 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 ARPP21Q9UBL0 812 aaPredicted RBP15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 SIK3Q9Y2K2 1263 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 CKAP4Q07065 602 aaKnown RBP15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 NNTQ13423 1086 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 CALML4Q96GE6 196 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 SEC63Q9UGP8 760 aaKnown RBP15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 FAM184BQ9ULE4 1060 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 BCL9LQ86UU0 1499 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 A0A1W2PQC6 194 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 POTEB3A0JP26 581 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 POTECB2RU33 542 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 NDUFAB1O14561 156 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 EDIL3O43854 480 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 TMOD1P28289 359 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 FLT3P36888 993 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 TRAPPC10P48553 1259 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 TCERG1LQ5VWI1 586 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 POTEBQ6S5H4 581 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 TEX11Q8IYF3 940 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 REXO1Q8N1G1 1221 aaKnown RBP15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 LARP4BQ92615 738 aaKnown RBP15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 SETDB2Q96T68 719 aa15.37■□□□□ 0.05
LPCAT3-203ENST00000535479 BCORQ6W2J9 1755 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 SCNN1DP51172 638 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 CASP5P51878 434 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 CORO7P57737 925 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 KIAA0753Q2KHM9 967 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 DCAF17Q5H9S7 520 aaPredicted RBP15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 ATP8A2Q9NTI2 1148 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms