RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 ARMCX2Q7L311 632 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 PIBF1Q8WXW3 757 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 MAP4K1Q92918 833 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 SPSB2Q99619 263 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 FAM184BQ9ULE4 1060 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 ATP11BQ9Y2G3 1177 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 SYNGAP1Q96PV0 1343 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 DNM1LO00429 736 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 SNHG28P0DPA3 235 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 PTPN5P54829 565 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 WTAPQ15007 396 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 SART3Q15020 963 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 LRRC41Q15345 812 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 CDC37Q16543 378 aaPredicted RBP10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 CCDC144BQ3MJ40 725 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 ASPRV1Q53RT3 343 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 BMP2KLQ5H9B9 411 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 NFXL1Q6ZNB6 911 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 ADGRF4Q8IZF3 695 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 STAG2Q8N3U4 1231 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 ANKS1AQ92625 1134 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 VTI1AQ96AJ9 217 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 LSG1Q9H089 658 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 ALG2Q9H553 416 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 SENP2Q9HC62 589 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 CYP39A1Q9NYL5 469 aa10.41□□□□□ -0.74
CCDC90B-219ENST00000534753 FRMPD3Q5JV73 1810 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 ASB14A6NK59 587 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 KLRF2D3W0D1 207 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 SLC27A2O14975 620 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 CDC45O75419 566 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 C6orf222P0C671 652 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 COL6A1P12109 1028 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 CTHP32929 405 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 NT5C2P49902 561 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 SEC23AQ15436 765 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 HABP4Q5JVS0 413 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 MAMDC4Q6UXC1 1216 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 SLC30A10Q6XR72 485 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 RNF207Q6ZRF8 634 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 RNF180Q86T96 592 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 HOMER1Q86YM7 354 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 MSL3Q8N5Y2 521 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 FAM133AQ8N9E0 248 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 NUP133Q8WUM0 1156 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 FGD4Q96M96 766 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 ABHD16BQ9H3Z7 469 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 NRBP1Q9UHY1 535 aa10.4□□□□□ -0.74
CCDC90B-219ENST00000534753 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 PRC1O43663 620 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 DXOO77932 396 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 FBXO45P0C2W1 286 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 RFX1P22670 979 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 RTP1P59025 263 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 TNFAIP2Q03169 654 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 PTPRNQ16849 979 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 QRICH1Q2TAL8 776 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 CREB3L3Q68CJ9 461 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 CATIPQ7Z7H3 387 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 FBXO11Q86XK2 927 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 RAB11FIP4Q86YS3 637 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 FBXO16Q8IX29 292 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 CLEC4DQ8WXI8 215 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 ZNF516Q92618 1163 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 MTRQ99707 1265 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 MYL10Q9BUA6 226 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 LRRC2Q9BYS8 371 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 JMJD4Q9H9V9 463 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 SPC25Q9HBM1 224 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 PRDM5Q9NQX1 630 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 PDGFCQ9NRA1 345 aa10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 ADD3Q9UEY8 706 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-219ENST00000534753 SYNRGQ9UMZ2 1314 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 MYADML2A6NDP7 307 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 CCDC69A6NI79 296 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 ADCY6O43306 1168 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 CENPBP07199 599 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 PTGS1P23219 599 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 MCM5P33992 734 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 ALDH5A1P51649 535 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 ANTXR2P58335 489 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 RPS6P62753 249 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 BEX3Q00994 111 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 KCNA10Q16322 511 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 MSS51Q4VC12 460 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 SLC39A5Q6ZMH5 540 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 MB21D2Q8IYB1 491 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 TBC1D5Q92609 795 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 UCN2Q96RP3 112 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 PRKAG2Q9UGJ0 569 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 MAD2L2Q9UI95 211 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 FKBPLQ9UIM3 349 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 PNMA2Q9UL42 364 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 ALPK3Q96L96 1907 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 SMCHD1A6NHR9 2005 aa10.38□□□□□ -0.75
CCDC90B-219ENST00000534753 ASTN1O14525 1302 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 ABCB11O95342 1321 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 WDR19Q8NEZ3 1342 aa10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 A0A1W2PQ45 241 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-219ENST00000534753 A0A1W2PQY0 241 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms