RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 ARHGAP1Q07960 439 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 STXBP2Q15833 593 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 QRICH1Q2TAL8 776 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 SEPT14Q6ZU15 432 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 SESTD1Q86VW0 696 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 FBXO11Q86XK2 927 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 CCDC155Q8N6L0 562 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 PHOSPHO2Q8TCD6 241 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 PPP1R13LQ8WUF5 828 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 AFG1LQ8WV93 481 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 TBC1D5Q92609 795 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 RMDN3Q96TC7 470 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 KRT23Q9C075 422 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 CNNM2Q9H8M5 875 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 COL20A1Q9P218 1284 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 CTNNA3Q9UI47 895 aa14.62□□□□□ -0.07
USF1-211ENST00000534633 PRRC2BQ5JSZ5 2229 aaKnown RBP14.62□□□□□ -0.07
USF1-211ENST00000534633 DHX16O60231 1041 aaKnown RBP14.61□□□□□ -0.07
USF1-211ENST00000534633 BAIAP3O94812 1187 aa14.61□□□□□ -0.07
USF1-211ENST00000534633 CA3P07451 260 aa14.61□□□□□ -0.07
USF1-211ENST00000534633 CASTP20810 708 aaKnown RBP14.61□□□□□ -0.07
USF1-211ENST00000534633 PTGISQ16647 500 aa14.61□□□□□ -0.07
USF1-211ENST00000534633 LY6KQ17RY6 165 aa14.61□□□□□ -0.07
USF1-211ENST00000534633 CAGE1Q8TC20 777 aa14.61□□□□□ -0.07
USF1-211ENST00000534633 AFAP1L1Q8TED9 768 aa14.61□□□□□ -0.07
USF1-211ENST00000534633 UBAC1Q9BSL1 405 aa14.61□□□□□ -0.07
USF1-211ENST00000534633 FTOQ9C0B1 505 aaKnown RBP eCLIP14.61□□□□□ -0.07
USF1-211ENST00000534633 TSPYL2Q9H2G4 693 aaPredicted RBP14.61□□□□□ -0.07
USF1-211ENST00000534633 JMJD4Q9H9V9 463 aa14.61□□□□□ -0.07
USF1-211ENST00000534633 POU3F3P20264 500 aaPredicted RBP14.6□□□□□ -0.07
USF1-211ENST00000534633 CHMP4BP1P59074 171 aa14.6□□□□□ -0.07
USF1-211ENST00000534633 PTH1RQ03431 593 aa14.6□□□□□ -0.07
USF1-211ENST00000534633 ARHGEF16Q5VV41 709 aa14.6□□□□□ -0.07
USF1-211ENST00000534633 EMID1Q96A84 441 aaPredicted RBP14.6□□□□□ -0.07
USF1-211ENST00000534633 COL4A4P53420 1690 aaPredicted RBP14.6□□□□□ -0.07
USF1-211ENST00000534633 BAZ2BQ9UIF8 2168 aaKnown RBP14.6□□□□□ -0.07
USF1-211ENST00000534633 KIF28PB7ZC32 967 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 EIF3JO75822 258 aaKnown RBP14.59□□□□□ -0.07
USF1-211ENST00000534633 PARNO95453 639 aaKnown RBP14.59□□□□□ -0.07
USF1-211ENST00000534633 GHRHRQ02643 423 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 DGKDQ16760 1214 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 IFIT1BQ5T764 474 aaKnown RBP14.59□□□□□ -0.07
USF1-211ENST00000534633 GDF6Q6KF10 455 aaPredicted RBP14.59□□□□□ -0.07
USF1-211ENST00000534633 CHST3Q7LGC8 479 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 HERC6Q8IVU3 1022 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 IL27Q8NEV9 243 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 ADAMTS19Q8TE59 1207 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 KAT2BQ92831 832 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 CTAGE1Q96RT6 745 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 KATNAL1Q9BW62 490 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 AMNQ9BXJ7 453 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 VAT1LQ9HCJ6 419 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 PXMP2Q9NR77 195 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 MAP3K20Q9NYL2 800 aaKnown RBP14.59□□□□□ -0.07
USF1-211ENST00000534633 DDX41Q9UJV9 622 aaKnown RBP14.59□□□□□ -0.07
USF1-211ENST00000534633 XIRP2A4UGR9 3374 aa14.59□□□□□ -0.07
USF1-211ENST00000534633 SIP14410 1827 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 GTPBP6O43824 516 aaPredicted RBP14.58□□□□□ -0.08
USF1-211ENST00000534633 CFBP00751 764 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 NR3C2P08235 984 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 SELPP16109 830 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 EIF2AK2P19525 551 aaKnown RBP14.58□□□□□ -0.08
USF1-211ENST00000534633 HSD17B4P51659 736 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 RBL2Q08999 1139 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 MICALL1Q8N3F8 863 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 STAG2Q8N3U4 1231 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 MTMR8Q96EF0 704 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 ESYT1Q9BSJ8 1104 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 GTF2IRD1Q9UHL9 959 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 MRVI1Q9Y6F6 885 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 MICAL3Q7RTP6 2002 aa14.58□□□□□ -0.08
USF1-211ENST00000534633 KLRF2D3W0D1 207 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 OPLAHO14841 1288 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 KCNJ6P48051 423 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 PSEN2P49810 448 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 TAP1Q03518 808 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 LAMC2Q13753 1193 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 SEC23AQ15436 765 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 LRRC8DQ7L1W4 858 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 SAMD3Q8N6K7 520 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 C7orf31Q8N865 590 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 PPTC7Q8NI37 304 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 RUFY2Q8WXA3 655 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 MAP4K1Q92918 833 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 UHRF1Q96T88 793 aaPredicted RBP14.57□□□□□ -0.08
USF1-211ENST00000534633 LSG1Q9H089 658 aaKnown RBP14.57□□□□□ -0.08
USF1-211ENST00000534633 MTCH2Q9Y6C9 303 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 DOCK5Q9H7D0 1870 aa14.57□□□□□ -0.08
USF1-211ENST00000534633 HAS3O00219 553 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 RFXAPO00287 272 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 ZBTB5O15062 677 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 TLL1O43897 1013 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 F2P00734 622 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 CXCL10P02778 98 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 WDR5P61964 334 aaKnown RBP14.56□□□□□ -0.08
USF1-211ENST00000534633 TRAF1Q13077 416 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 MFSD10Q14728 455 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 AAK1Q2M2I8 961 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 CNKSR3Q6P9H4 555 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 KCNV1Q6PIU1 500 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms