RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 RBM27Q9P2N5 1060 aaKnown RBP24.58■■□□□ 1.53
PKP3-211ENST00000534401 DDX41Q9UJV9 622 aaKnown RBP24.58■■□□□ 1.53
PKP3-211ENST00000534401 SCN10AQ9Y5Y9 1956 aa24.57■■□□□ 1.52
PKP3-211ENST00000534401 STAM2O75886 525 aa24.57■■□□□ 1.52
PKP3-211ENST00000534401 CABYRO75952 493 aa24.57■■□□□ 1.52
PKP3-211ENST00000534401 XRRA1Q6P2D8 792 aa24.57■■□□□ 1.52
PKP3-211ENST00000534401 ANKRD33Q7Z3H0 272 aa24.57■■□□□ 1.52
PKP3-211ENST00000534401 HEATR3Q7Z4Q2 680 aa24.57■■□□□ 1.52
PKP3-211ENST00000534401 CUL5Q93034 780 aa24.57■■□□□ 1.52
PKP3-211ENST00000534401 TOX2Q96NM4 488 aa24.57■■□□□ 1.52
PKP3-211ENST00000534401 RIC8AQ9NPQ8 531 aa24.57■■□□□ 1.52
PKP3-211ENST00000534401 NAP1L2Q9ULW6 460 aaPredicted RBP24.57■■□□□ 1.52
PKP3-211ENST00000534401 MYH7BA7E2Y1 1941 aa24.57■■□□□ 1.52
PKP3-211ENST00000534401 TGFB3P10600 412 aa24.56■■□□□ 1.52
PKP3-211ENST00000534401 CCND2P30279 289 aa24.56■■□□□ 1.52
PKP3-211ENST00000534401 KCNV1Q6PIU1 500 aa24.56■■□□□ 1.52
PKP3-211ENST00000534401 SEPT14Q6ZU15 432 aa24.56■■□□□ 1.52
PKP3-211ENST00000534401 SMARCC2Q8TAQ2 1214 aa24.56■■□□□ 1.52
PKP3-211ENST00000534401 COPS5Q92905 334 aa24.56■■□□□ 1.52
PKP3-211ENST00000534401 EMID1Q96A84 441 aaPredicted RBP24.56■■□□□ 1.52
PKP3-211ENST00000534401 GLT1D1Q96MS3 346 aa24.56■■□□□ 1.52
PKP3-211ENST00000534401 INPP4AQ96PE3 977 aaPredicted RBP24.56■■□□□ 1.52
PKP3-211ENST00000534401 RNF26Q9BY78 433 aaPredicted RBP24.56■■□□□ 1.52
PKP3-211ENST00000534401 STARD7Q9NQZ5 370 aa24.56■■□□□ 1.52
PKP3-211ENST00000534401 ESYT2A0FGR8 921 aa24.55■■□□□ 1.52
PKP3-211ENST00000534401 ZEB2O60315 1214 aa24.55■■□□□ 1.52
PKP3-211ENST00000534401 SCG2P13521 617 aa24.55■■□□□ 1.52
PKP3-211ENST00000534401 ICAM3P32942 547 aa24.55■■□□□ 1.52
PKP3-211ENST00000534401 ARHGAP1Q07960 439 aa24.55■■□□□ 1.52
PKP3-211ENST00000534401 TRIM60Q495X7 471 aa24.55■■□□□ 1.52
PKP3-211ENST00000534401 PCNX4Q63HM2 1172 aa24.55■■□□□ 1.52
PKP3-211ENST00000534401 NCOA5Q9HCD5 579 aaKnown RBP24.55■■□□□ 1.52
PKP3-211ENST00000534401 MYCLP12524 364 aaPredicted RBP24.54■■□□□ 1.52
PKP3-211ENST00000534401 CLK2P49760 499 aaKnown RBP24.54■■□□□ 1.52
PKP3-211ENST00000534401 CPT1AP50416 773 aa24.54■■□□□ 1.52
PKP3-211ENST00000534401 TLE2Q04725 743 aa24.54■■□□□ 1.52
PKP3-211ENST00000534401 LY6KQ17RY6 165 aa24.54■■□□□ 1.52
PKP3-211ENST00000534401 OR6J1Q8NGC5 347 aa24.54■■□□□ 1.52
PKP3-211ENST00000534401 GDF15Q99988 308 aa24.54■■□□□ 1.52
PKP3-211ENST00000534401 SEZ6LQ9BYH1 1024 aa24.54■■□□□ 1.52
PKP3-211ENST00000534401 GLT8D2Q9H1C3 349 aa24.54■■□□□ 1.52
PKP3-211ENST00000534401 GRIN2DO15399 1336 aa24.54■■□□□ 1.52
PKP3-211ENST00000534401 ARVCFO00192 962 aa24.53■■□□□ 1.52
PKP3-211ENST00000534401 GH1P01241 217 aa24.53■■□□□ 1.52
PKP3-211ENST00000534401 NAPAP54920 295 aa24.53■■□□□ 1.52
PKP3-211ENST00000534401 CCT2P78371 535 aaKnown RBP24.53■■□□□ 1.52
PKP3-211ENST00000534401 PURAQ00577 322 aaKnown RBP24.53■■□□□ 1.52
PKP3-211ENST00000534401 CXCL17Q6UXB2 119 aa24.53■■□□□ 1.52
PKP3-211ENST00000534401 ZMYND12Q9H0C1 365 aa24.53■■□□□ 1.52
PKP3-211ENST00000534401 POLR3EQ9NVU0 708 aa24.53■■□□□ 1.52
PKP3-211ENST00000534401 ZMYND8Q9ULU4 1186 aaPredicted RBP24.53■■□□□ 1.52
PKP3-211ENST00000534401 ATP11BQ9Y2G3 1177 aa24.53■■□□□ 1.52
PKP3-211ENST00000534401 TRIOBPQ9H2D6 2365 aa24.53■■□□□ 1.52
PKP3-211ENST00000534401 RANBP2P49792 3224 aaKnown RBP24.52■■□□□ 1.52
PKP3-211ENST00000534401 A0A0U1RQG5 324 aaPredicted RBP24.52■■□□□ 1.52
PKP3-211ENST00000534401 KPNA6O60684 536 aa24.52■■□□□ 1.52
PKP3-211ENST00000534401 HOXD8P13378 290 aaPredicted RBP24.52■■□□□ 1.52
PKP3-211ENST00000534401 SEMA3FQ13275 785 aa24.52■■□□□ 1.52
PKP3-211ENST00000534401 UBE2SQ16763 222 aa24.52■■□□□ 1.52
PKP3-211ENST00000534401 PHKBQ93100 1093 aa24.52■■□□□ 1.52
PKP3-211ENST00000534401 LARP6Q9BRS8 491 aaKnown RBP24.52■■□□□ 1.52
PKP3-211ENST00000534401 PDLIM7Q9NR12 457 aa24.52■■□□□ 1.52
PKP3-211ENST00000534401 TPCN1Q9ULQ1 816 aa24.52■■□□□ 1.52
PKP3-211ENST00000534401 SMCO2A6NFE2 343 aa24.51■■□□□ 1.51
PKP3-211ENST00000534401 SPATA31C2B4DYI2 1134 aa24.51■■□□□ 1.51
PKP3-211ENST00000534401 PFKFB2O60825 505 aa24.51■■□□□ 1.51
PKP3-211ENST00000534401 FOSP01100 380 aaPredicted RBP24.51■■□□□ 1.51
PKP3-211ENST00000534401 BMP8BP34820 402 aa24.51■■□□□ 1.51
PKP3-211ENST00000534401 SP2Q02086 613 aa24.51■■□□□ 1.51
PKP3-211ENST00000534401 ANKRD1Q15327 319 aa24.51■■□□□ 1.51
PKP3-211ENST00000534401 PCDHA6Q9UN73 950 aa24.51■■□□□ 1.51
PKP3-211ENST00000534401 PCDHA8Q9Y5H6 950 aa24.51■■□□□ 1.51
PKP3-211ENST00000534401 MRVI1Q9Y6F6 885 aa24.51■■□□□ 1.51
PKP3-211ENST00000534401 LTBP2Q14767 1821 aa24.51■■□□□ 1.51
PKP3-211ENST00000534401 ADCY7P51828 1080 aa24.5■■□□□ 1.51
PKP3-211ENST00000534401 AK2P54819 239 aa24.5■■□□□ 1.51
PKP3-211ENST00000534401 LAMC2Q13753 1193 aa24.5■■□□□ 1.51
PKP3-211ENST00000534401 MYSM1Q5VVJ2 828 aa24.5■■□□□ 1.51
PKP3-211ENST00000534401 KIF2CQ99661 725 aa24.5■■□□□ 1.51
PKP3-211ENST00000534401 COLQQ9Y215 455 aaPredicted RBP24.5■■□□□ 1.51
PKP3-211ENST00000534401 KIAA0355O15063 1070 aa24.49■■□□□ 1.51
PKP3-211ENST00000534401 SYN1P17600 705 aa24.49■■□□□ 1.51
PKP3-211ENST00000534401 FAAP100Q0VG06 881 aa24.49■■□□□ 1.51
PKP3-211ENST00000534401 BRDTQ58F21 947 aaPredicted RBP24.49■■□□□ 1.51
PKP3-211ENST00000534401 CELF3Q5SZQ8 465 aaKnown RBP24.49■■□□□ 1.51
PKP3-211ENST00000534401 AFG1LQ8WV93 481 aa24.49■■□□□ 1.51
PKP3-211ENST00000534401 SH3GLB2Q9NR46 395 aa24.49■■□□□ 1.51
PKP3-211ENST00000534401 UBIAD1Q9Y5Z9 338 aa24.49■■□□□ 1.51
PKP3-211ENST00000534401 MROH7Q68CQ1 1323 aa24.49■■□□□ 1.51
PKP3-211ENST00000534401 TRIM43BA6NCK2 446 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 SPDYE3A6NKU9 549 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 CD4P01730 458 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 MMP3P08254 477 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 SCRN1Q12765 414 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 AP3B2Q13367 1082 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 ITGA7Q13683 1181 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 GNPTABQ3T906 1256 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 SH3RF1Q7Z6J0 888 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 FAM126BQ8IXS8 530 aa24.48■■□□□ 1.51
PKP3-211ENST00000534401 FAM177A1Q8N128 213 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms